KEGG T00196: STH6

Symbiobacterium thermophilum: STH6

Entry

STH6              CDS       T00196

Symbol

gyrB

Name

(GenBank) DNA gyrase B subunit

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

sth Symbiobacterium thermophilum

Brite

KEGG Orthology (KO) [BR:sth00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sth03032]
    STH6 (gyrB)
   03400 DNA repair and recombination proteins [BR:sth03400]
    STH6 (gyrB)
Enzymes [BR:sth01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     STH6 (gyrB)
DNA replication proteins [BR:sth03032]
Prokaryotic type
  DNA Topoisomerases
   STH6 (gyrB)
DNA repair and recombination proteins [BR:sth03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      STH6 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GMC_oxred_C

Other DBs

NCBI-ProteinID:

BAD38991

UniProt:

Q67TK2

Position

4461..6377

AA seq 638 aa
MNTHGTEQYTGEQIQVLEGLEAVRRRPGMYIGGTSQRGLHHLIWEIIDNAVDERLAGFCD
KIVVTLHSDGSVSVSDNGRGIPVDIHPKTGISTVETVYTMLHAGGKFGGGAYKVSGGLHG
VGAAVVNALSRKLYIQVKQNGGVYEVEFANGGKTLYPLRRVGDTKEHGTYVRFWPDPEIF
ESVEFDSEAIVTRLRDTAFLNQGLFIQFIDEKAGAEYRFKYNEGLQTFVQYLNRSREPLH
AKPIYVFKATDTQEMELAIQYTDAYSENILSFANNIRTVEGGTHETGLKTALTRVINSYA
RKYKLLKDNEDNLSGEDIREGMTAILSVKLQEPQFEGQTKTKLGSSEMETFVAAAVSEGL
SDFLEENPAIAKRIVEKALSAARAREAARKARELVRRKSALEITALPGKLTDCTSRDPSE
SELFLVEGDSAGGSAKMGRDRRIQAVLPLRGKILNVEKARLDKILSNEEIRTLITAVGAG
IGDDFDISKCRYHKVIIMTDADVDGSHIRTLLLTFFFRFMRPLIEAGYLYIASPPLYMIR
KGKQVYYAYSEQEKDQVIARIGGVTDKPQRYKGLGEMNPEQLWETTMDPSKRILYKVTME
DAAEATALFETLMGEKVEPRREFIQRNAHLVQNLDTIG

NT seq 1917 nt +upstreamnt +downstreamnt
atgaacacccacgggacggagcagtacaccggggagcagattcaggtgctggaagggctc
gaggcggtccgccgccgtccggggatgtatatcggcggcacctcgcagcgcgggctccac
cacctgatctgggagatcatcgacaacgcggtcgatgagcggctggcggggttctgcgac
aagatcgtggtaacgctgcacagcgatggctcggtgtccgtttcggacaacggccgcggc
atccccgtggacatacatcccaagacgggcatctccaccgttgagacggtctacacgatg
ctgcacgccggcggcaagttcggcggcggcgcctataaggtgtccggcggcctgcacggc
gtgggtgcggccgtggtcaacgccctttcccggaagctttacatccaggtgaagcagaac
ggcggcgtgtacgaggtggagttcgccaacggcggcaagacgctctacccgctgcgccgc
gtgggcgacaccaaggaacacggcacctatgtgcgcttctggcccgatccggagatcttc
gagtcggtggagttcgattccgaggcgattgtgacgcgcctcagggacactgccttcctc
aaccaggggctcttcatccagttcatcgacgagaaggccggcgcggagtaccggttcaag
tacaacgaggggctccagaccttcgtccagtacctcaaccggtcccgcgagccgctgcac
gccaagcccatctacgtcttcaaggccaccgacacccaggagatggagctggcgatccag
tacaccgatgcctacagcgaaaacatcctgagctttgccaacaacatccgcaccgtggag
ggcggcacgcacgagacgggcctgaagacggccctcacgcgcgtcatcaacagctacgcc
cgcaagtacaagctcctgaaggacaacgaggacaacctctcgggcgaggacatccgcgag
ggcatgaccgccatcctctcggtgaagctgcaggagccccagttcgagggtcagaccaag
accaagctgggctcctccgagatggagaccttcgtcgccgcggccgtgagcgaggggctc
tccgatttcctggaggagaaccccgccatcgcgaagcgcatcgtggaaaaggcgctcagc
gccgcccgggcccgggaggcggcccgcaaggcccgagagctggtccgtcgcaagagcgcg
ctggagatcacggcgctgccgggcaagctcaccgactgcacctcccgggatcccagcgaa
tccgagctcttcctggtagagggcgactcggccggcggttcggccaagatgggccgcgac
cggcgcatccaggcggtcctgcccctcaggggcaagatcctcaacgtggaaaaggcccgg
ctggacaagatcctctccaacgaggaaatccgcacgctgatcaccgcggtgggcgcgggg
atcggcgacgacttcgacatctccaaatgccgttaccacaaagtgatcatcatgaccgac
gccgacgtggacggcagccacatccgcaccctgctcctcacgtttttcttccgcttcatg
cggccgctgatcgaggccggctatctctacatcgccagcccgccgctgtacatgatccgg
aagggcaagcaggtgtactacgcctactccgagcaggagaaggaccaggtgatcgcgcgc
atcggcggcgtcacggacaagccgcagcggtacaagggcctcggcgagatgaacccggag
cagctgtgggagaccacgatggatccctcgaagcggatcctctacaaggtgaccatggag
gacgccgccgaggcgaccgccctgttcgaaaccctgatgggagagaaggttgagccccgc
cgtgagttcatccagcggaacgcccacctcgtccagaacctcgacaccatcggatag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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