KEGG   Sphingobacterium thalpophilum: NCTC11429_02234
Entry
NCTC11429_02234   CDS       T06778                                 
Symbol
cca
Name
(GenBank) Multifunctional CCA protein
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
stha  Sphingobacterium thalpophilum
Pathway
stha03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:stha00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NCTC11429_02234 (cca)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stha03019]
    NCTC11429_02234 (cca)
Enzymes [BR:stha01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     NCTC11429_02234 (cca)
Messenger RNA biogenesis [BR:stha03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     NCTC11429_02234 (cca)
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd HD tRNA_NucTran2_2
Other DBs
NCBI-ProteinID: VTR39759
UniProt: A0A4U9V4G3
Position
1:2582482..2583915
AA seq 477 aa
MYDNLQHPIFTIIKELAEKTNTECYVIGGYVRDYLMQRPFKNDVDIVVVGSGIEFATLLG
EKLQTKVAVYKNFGTAMLVYDGLNVEFVGARRESYRANSRKPIVEDGTLADDQNRRDFTI
NAMAFSLNKADYGALVDPFNGVKDLEHRIIRTPLDPIETFSDDPLRMMRAIRFATQLNFK
IAIEAITAISETKDRIKIISKERIIDEINKIMLSTKPSVGFKYLFDTGLLELIFPAMYNL
HGVDIIDGKGHKDNFYHTLEVLDNVCEQSGDLWLRWAAVMHDIAKPATKRFDKKLGWTFH
GHEDRGARMVPKLFTELKLPLNEKMKFVQKLVQLHLRPIVLAQDIVTDSAVRRLLFEAGD
DIEALMMLCHADVTTKNEFKKKKYRQNFELVKQKLKDVEERDKIRNWQPPISGQDIMILF
GLTPGRTVGQLKNIIREAILEGEIPNSRIEAYHYLLQKAQDLGLTAKQEIPLEISNS
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgtacgataatttacaacatccaatatttacaatcatcaaagagcttgctgaaaagaca
aataccgaatgttacgtcatcggcggctatgtacgggactatctgatgcaacgtcctttc
aaaaatgacgtggatattgttgttgtgggaagtggtattgaatttgccaccttattaggt
gaaaaactgcagaccaaggtggctgtgtacaaaaactttggcactgccatgttggtgtac
gacggcctaaacgtggaatttgtcggcgccagaagagaatcgtatcgtgccaattcccga
aaaccgattgtggaagacggaacattggcggatgatcagaaccgccgcgattttaccatc
aatgcgatggctttttcgttaaataaagctgactacggtgccctggtggatcctttcaac
ggggtgaaggacctcgagcaccgcattattcggacaccgcttgatcccatagaaaccttt
tcggatgacccgctacgcatgatgcgtgcgattcgtttcgcaacgcagctgaacttcaaa
attgctatagaggccatcaccgcaatttccgaaaccaaagatcgtatcaaaatcatctcc
aaggaacggattattgatgagatcaataagatcatgctctccaccaaaccgtcggtggga
tttaaatacctttttgatacaggactgcttgaactgatttttccggcgatgtacaacctg
catggggtagacatcattgacggaaaaggacataaagacaacttctaccatacactggaa
gtgctggacaatgtttgcgagcaatctggcgatttatggctgcgctgggcggccgtcatg
catgatattgccaagcctgctacaaaacgctttgataaaaaactcggctggacgtttcac
ggacatgaagaccgtggtgcccgtatggtgcctaagctttttaccgaactgaaattgccg
ctcaatgaaaagatgaagtttgttcagaaactggtacagctgcacttgcgccctatcgtg
ctggcccaggatatcgtgacagactccgcagtgcgacgtctcttgtttgaggcgggggac
gatattgaagcgcttatgatgctttgccatgccgatgtgacaaccaagaatgagtttaaa
aagaaaaaatatcgacagaattttgagcttgtgaaacaaaagctcaaagatgttgaagaa
cgcgacaaaattcgtaactggcagcctcctatcagcggacaggatatcatgatcctgttt
gggctgacaccgggccgcacggtggggcagctaaaaaacataatccgggaggcgatattg
gaaggcgaaattcccaattcgcgaatcgaagcatatcactatctcctgcaaaaggcccaa
gatttaggcttaactgccaaacaagaaatcccattggaaatttccaattcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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