KEGG   Sphingobacterium thalpophilum: NCTC11429_03615
Entry
NCTC11429_03615   CDS       T06778                                 
Symbol
hpaIIM_2
Name
(GenBank) Modification methylase HpaII
  KO
K00558  DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
Organism
stha  Sphingobacterium thalpophilum
Pathway
stha00270  Cysteine and methionine metabolism
stha01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:stha00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    NCTC11429_03615 (hpaIIM_2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:stha03000]
    NCTC11429_03615 (hpaIIM_2)
   03032 DNA replication proteins [BR:stha03032]
    NCTC11429_03615 (hpaIIM_2)
   03036 Chromosome and associated proteins [BR:stha03036]
    NCTC11429_03615 (hpaIIM_2)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:stha02048]
    NCTC11429_03615 (hpaIIM_2)
Enzymes [BR:stha01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.37  DNA (cytosine-5-)-methyltransferase
     NCTC11429_03615 (hpaIIM_2)
Transcription factors [BR:stha03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    NCTC11429_03615 (hpaIIM_2)
DNA replication proteins [BR:stha03032]
 Eukaryotic type
  DNA Replication Termination Factors
   DNA methylation enzymes
    NCTC11429_03615 (hpaIIM_2)
Chromosome and associated proteins [BR:stha03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    NCTC11429_03615 (hpaIIM_2)
Prokaryotic defense system [BR:stha02048]
 Restriction and modification system (R-M system)
  Type II R-M system
   DNA methyltransferases
    NCTC11429_03615 (hpaIIM_2)
SSDB
Motif
Pfam: DNA_methylase M3K_C SBDS
Other DBs
NCBI-ProteinID: VTR48004
UniProt: A0A4U9VWJ2
Position
1:4197558..4198736
AA seq 392 aa
MKGYSVEVKTKKTTPKKTGDNARLDSKNKFNFIDLFAGIGGFHIAMHSVGGKCVFASEID
KFARITYEHNYKKWSPELFESGNFNQDITDKSLDYNSIPQFDLLCAGFPCQPFSHAGLKK
GFGDTRGTLFFNIEEIVRTKIEASKKQNNNDLIPKVLFLENVKGLKNHDKGRTFETIKHH
LEELGYEVRAEVLNSKNFGVPQNRERIFIVAWYKQLVQATDFRFPWGLNREGTPIFERNL
RDPESLPTSVGQILLDEEELERIESLTGRTYTISDKLWDGHQRRKKEHGEKGNGFGYSLF
RDDSPYTSTISARYYKDGSEILIDQSTLGKRPRKLHPIEAARLQGYPIDERNENERFEIA
VSDAQAYKQFGNSVSVPVIKTLAKEIISQLLK
NT seq 1179 nt   +upstreamnt  +downstreamnt
atgaaaggatatagcgtggaagtaaagactaaaaaaactaccccgaagaaaacaggggat
aatgcaaggctagatagcaaaaacaaattcaattttatagatttatttgcgggtattggt
ggttttcatatcgcgatgcacagcgtaggaggtaaatgcgttttcgcatccgaaattgac
aagtttgccagaatcacttacgagcataactacaaaaagtggtctcccgaactgtttgag
tcgggtaattttaatcaggatatcacagataagagtctggattacaatagtattccgcaa
tttgatcttctgtgtgcgggatttccttgtcagcctttttctcacgcgggattaaaaaaa
ggctttggcgatacaagaggtacattgtttttcaatattgaagagatcgtacgcaccaaa
atagaggcatcaaaaaagcaaaacaataacgaccttatccctaaggttctatttttggaa
aatgtgaagggattgaaaaatcatgataagggaagaacttttgagactataaagcatcat
ctcgaggaattggggtatgaggttagagccgaagttttgaatagtaagaattttggggtg
ccgcaaaatcgggagcggatttttattgtagcatggtataaacaactggtacaggccact
gattttagatttccatgggggctcaacagagagggtacaccgatattcgaacgcaatctg
agagatcccgagagtctgcctacgagtgtgggccagattttgcttgatgaggaagaactt
gaacggatcgagtccctgacaggtcggacctatacgatttcggataagctttgggacggc
catcagcggcgcaaaaaggagcatggtgaaaaagggaacggatttggatattcgcttttt
cgagatgattccccttataccagcactatatccgcgcgctactacaaggatgggtcggag
atattaattgatcagagcaccctgggcaaaaggccgcgtaaactacaccccatcgaagca
gcacggttgcaagggtatcctatagacgaacgtaatgagaacgagcggtttgaaatagcg
gtttcggatgcgcaggcctataaacagtttggtaattctgtctcggttccggtgatcaaa
accttagcgaaagagattatcagccaactactgaagtaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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