KEGG   Caldimonas thermodepolymerans: IS481_01980
Entry
IS481_01980       CDS       T06911                                 
Name
(GenBank) DNA topoisomerase III
  KO
K03169  DNA topoisomerase III [EC:5.6.2.1]
Organism
sthm  Caldimonas thermodepolymerans
Brite
KEGG Orthology (KO) [BR:sthm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sthm03032]
    IS481_01980
Enzymes [BR:sthm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     IS481_01980
DNA replication proteins [BR:sthm03032]
 Prokaryotic type
  DNA Topoisomerases
   IS481_01980
SSDB
Motif
Pfam: Topoisom_bac Toprim_Crpt Toprim PADR1_Zn_ribbon OrfB_Zn_ribbon TF_Zn_Ribbon
Other DBs
NCBI-ProteinID: QPC31979
Position
403097..405682
AA seq 861 aa
MGKTLVIAEKPSVAQDIVRALTPVVGKFEKHDDYFENEKYIVSSAVGHLVEIKAPEEYDV
KRGKWSFANLPVIPPRFELSPIDKNKGRLNTLVKLIKRKDVTELINACDAGREGELIFRL
IVQYATPARGGLNKDIKRLWLQSMTPQAIREGFEQLRSDEQMQPLAEAARCRSEADWLVG
INGTRAMTAFNSRDGGFFLTTVGRVQTPTLSIVVEREEKIRKFVPRDYWEVRATFDAQAG
SYEGKWFDPRWKKAENDPELRADRLWDAKTAEAIAEAVRGRSGTVTEESKPSSQLSPLLY
DLTSLQREANSRFGFSAKTTLALAQALYEKHKVLTYPRTDSRALPEDYIGVVKKTMEMLS
GEDATRAYAPHAEKALREGYVKPNKRVFDNAKVSDHFAIIPTLQAPKNLTDAEQKLYDMV
VKRFLAVFFPAAEYQVTTRITTVEHQGQSYSFQTNGKVLVKPGWLAVYGKEVQEDDATLV
PVQPGETVRNAEVEVKALKTRPPARYTEATLLSAMEGAGKLVEDDELREAMQEKGLGTPA
TRAAIIEGLIAEKYLVRDGRELIPTAKAFQLMTLLRGLGVEDLTKPELTGNWEYQLAQME
RGRLSREAFMQEIARMTERIVQKAKEYDRDTIPGDYATLTTPCPNCGGVVKENYRRFTCT
GQGGNDEGCGFSISKIPGGRSFELHEVEQFLRDKHIGPLDGFRSKAGWPFTAELKLVRDE
EIGNYKLEFDFGEEARKEAEEGEVDFSAQEPLGHCPKCKGRVYEHGTSYVCEKTVGPHAT
CDFKSGKIILQQPVSREQMGKLLATGRTDLLENFVSNKTRRKFKAFLVWDEKEGKVGFEF
EPRAAKAPAKKAPAKKVAARS
NT seq 2586 nt   +upstreamnt  +downstreamnt
atgggcaagacactggtgatcgccgagaagccttccgtcgcgcaggacatcgtccgggcg
ctgacgccggtggtcggcaaattcgagaagcacgacgattacttcgagaacgagaagtac
atcgtgagctccgccgtcggccacctggtcgagatcaaggcgccggaggaatacgacgtc
aagcgcggcaagtggagcttcgccaacctgccggtgatcccgccccgcttcgagctcagc
ccgatcgacaagaacaagggccggctcaacaccctggtcaagctgatcaagcgcaaggac
gtcaccgaactgatcaacgcctgcgacgcggggcgcgagggcgagctgatcttccgtctc
atcgtgcagtacgcgacgccggcgcgcggcggcctgaacaaggacatcaagcggctgtgg
ctgcagtcgatgacgccgcaagccatccgcgagggcttcgagcagctgcgcagcgacgag
cagatgcagccgctggccgaggcggcgcgctgccgcagcgaggctgactggctggtgggc
atcaacggcacgcgcgcgatgaccgcgttcaactcgcgcgacggcggcttcttcctcacc
accgtcggccgcgtgcagacgccgacgctgtccatcgtggtcgagcgcgaggagaagatc
cgcaagttcgtgccgcgcgactactgggaagtgcgcgccaccttcgatgcccaggccggc
agctacgagggcaagtggttcgaccccaggtggaagaaggccgagaacgaccccgagctg
cgcgccgaccgcctgtgggacgcgaagaccgccgaggcgatcgccgaggcggtgcgcggc
cgcagcggcacggtcaccgaggagtccaagcccagctcgcagctcagcccgctgttgtac
gacctgacctcgctgcagcgcgaggccaactcgcgcttcggcttctcggccaagaccacg
ctggcgctggcacaggccctgtacgaaaagcacaaggtgctgacctacccgcggacggac
tcgcgcgcgctgcccgaggactacatcggcgtcgtgaagaagacgatggagatgctctcc
ggcgaggacgccacgcgcgcctacgcgccgcatgccgagaaggcgctgcgcgagggctac
gtgaagcccaacaagcgcgtgttcgacaacgccaaggtgtcggaccacttcgccatcatc
ccgaccctgcaggcgccgaagaacctcaccgacgccgagcagaagctctacgacatggtc
gtcaagcgcttcctcgcggtgttcttcccggcggccgagtaccaggtcaccacgcgcatc
acgaccgtggaacaccaggggcagtcctacagcttccagaccaacggcaaggtgctggtc
aagccgggctggctggcggtctacggcaaggaggtgcaggaagacgacgcgacgctggtg
ccggtgcagcccggcgagacggtgcgcaacgccgaagtcgaggtcaaggcgctcaagacc
cggccgccggcgcgctacaccgaagcgacgctgctgtcggcgatggaaggcgcgggcaag
ctggtcgaggacgacgagctgcgcgaggcgatgcaggagaagggcctgggcacgccggcc
acccgcgcggccatcatcgaaggcctgatcgccgagaagtacctggtgcgcgacggccgc
gagctgatccccaccgccaaggccttccagctgatgacgctgctgcgtggcctgggtgtg
gaggacctcaccaagcccgagctgaccggcaactgggagtaccagctcgcgcagatggag
cgcggacggctcagccgcgaggccttcatgcaggagatcgcgcgcatgaccgagcgcatc
gtgcagaaggccaaggagtacgaccgcgacaccatcccgggcgactatgcgacgttgacc
acgccgtgcccgaactgcggcggcgtcgtcaaggaaaactaccgccgcttcacctgcacc
ggccagggcggcaacgacgagggctgcggcttctcgatcagcaagatcccgggcgggcgc
agcttcgagctgcacgaggtcgaacagttcctgcgcgacaagcacatcggcccgctcgac
ggcttccgctccaaggccggctggccgttcaccgccgagctgaagctggtgcgcgacgag
gagatcggcaactacaagctcgagttcgacttcggcgaggaggcccgcaaggaggccgag
gaaggcgaggtcgacttcagcgcgcaggagccgctgggccattgcccgaagtgcaagggc
cgcgtctacgagcacggcaccagctacgtctgcgagaagaccgtgggcccgcacgcgacc
tgcgacttcaagagcggcaagatcatcctgcagcagcccgtctcgcgcgagcagatgggc
aagctgctcgccaccggccgcaccgatctgctggagaacttcgtctccaacaagacgcgc
cgcaagttcaaggccttcctggtctgggacgagaaggaaggcaaggtcggcttcgagttc
gagccgcgcgcggccaaggcccccgcgaagaaggcgccggcaaagaaggtcgcggccagg
tcctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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