KEGG T01504: STP

Streptococcus parauberis: STP_0462

Entry

STP_0462          CDS       T01504

Symbol

gyrB

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

stk Streptococcus parauberis

Brite

KEGG Orthology (KO) [BR:stk00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:stk03032]
    STP_0462 (gyrB)
   03400 DNA repair and recombination proteins [BR:stk03400]
    STP_0462 (gyrB)
Enzymes [BR:stk01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     STP_0462 (gyrB)
DNA replication proteins [BR:stk03032]
Prokaryotic type
  DNA Topoisomerases
   STP_0462 (gyrB)
DNA repair and recombination proteins [BR:stk03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      STP_0462 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3

Other DBs

NCBI-ProteinID:

AEF24910

Position

493002..494954

AA seq 650 aa
MVEDIKQSNDKAQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEA
LAGFASHIEVYIEEDNSITVVDDGRGIPVDIQAKTGRPAVETVFTVLHAGGKFGGGGYKV
SGGLHGVGSSVVNALSSQLDVRVFKNGSIHYQEFKRGIVYDDLKIIGETDLTGTTVHFTP
DPEIFTETVEFDFEKLAKRVQELAFLNRGLRISIADKRNGIEQVKDYHYEGGIASYVEFL
NEKKDVIIEHPIFTDGEMDGIAVEVAMQYTTGYHENVMSFANNIHTHEGGTHEQGFRTAL
TRVINDYAKKNKILKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKIT
NRLFSDALQRFLLENPQVARKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLAD
CSSNNASQNELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKATMDKILANEEIRS
LFTAMGTGFGAEFDVAKARYHKLVIMTDADVDGAHIRTLLLTLIYRFMRPVLEAGFVYIA
QPPIYGVKVGSEIKEYIQPSTNQEELLKASLEKYSVGRSRPTVQRYKGLGEMDDHQLWET
TMDPEHRLMARVTVDDAAEADKVFDMLMGDRVEPRREFIEENAVYSTLDI

NT seq 1953 nt +upstreamnt +downstreamnt
atggttgaagatattaaacagtcaaatgataaagctcaagaatatgatgctagtcagatt
caagtcttagaaggattagaagccgttcggatgcgtcctgggatgtatattggttcaaca
tctaaagaaggacttcatcacttggtttgggaaattgtcgataactcaattgatgaggcc
ttggcagggtttgctagtcatattgaagtatacattgaagaagacaactcaatcacagtt
gtcgatgatgggcgtggtattccagtcgatatccaagctaagacaggtcgtcctgctgtt
gaaactgtatttactgttttacatgctggaggtaagtttggcggtggcggttataaggtt
tcaggtggactccatggtgttggatcatcagttgttaatgctttatcatctcagttagat
gttcgtgtcttcaaaaatggtagcattcattatcaagagtttaaacgtggaatcgtttat
gatgatttgaaaattattggagaaacggatttaacaggaacaacagttcactttactccg
gacccagaaatttttacagaaacagttgaatttgattttgaaaagcttgctaagcgtgtc
caagaattagcatttttaaaccgtggattacgaatctcaattgccgataaacgtaatgga
attgaacaagtcaaagattaccattatgaaggtggtatcgctagctatgttgaattttta
aatgagaaaaaagatgttattatcgaacatcctatctttactgatggagagatggatggc
attgctgtcgaagttgcgatgcaatatacaacaggctatcatgaaaatgtaatgagtttt
gccaacaatattcatacacatgaaggtggaacccatgaacaaggttttagaactgcccta
acacgtgttattaatgattatgctaaaaagaataagattctcaaagaaaatgaagataac
ttaactggtgaggatgttcgtgaaggattgactgctgttatctctgtcaaacaccctaat
cctcaatttgaaggacaaactaaaacaaaattaggtaactcagaagttgttaaaattact
aatcgattatttagtgatgccttacaacgattcttacttgagaatccacaagttgcccgt
aaaatcgtagaaaaaggaattttagcttcgaaagctagaattgctgcaaaacgtgcacgt
gaagtaacgcgaaagaaatctggtttagaaatctctaatttaccaggtaagctagctgac
tgttcatcaaataatgccagtcaaaacgaactatttatcgtcgaaggagattctgctgga
ggttcagcaaaatctggtcgtaaccgtgaatttcaggcaattttaccaattcgtggtaaa
atcttaaacgtggaaaaagcaacaatggataaaattcttgctaatgaggaaatccgcagt
ttatttacagcgatgggaactggttttggtgcagaatttgatgtagctaaagcaagatat
cacaagttagttattatgactgatgccgatgtcgatggtgctcatatccgtacacttttg
ttaactttgatctatcgctttatgagaccagtccttgaagccggttttgtttatatcgca
caaccaccaatttatggtgtgaaggttggtagcgaaattaaagagtatattcagcctagt
actaaccaagaggaacttttaaaagcttctcttgaaaaatatagtgtaggtcgttcaaga
ccaactgtacagcgttataaaggtcttggagaaatggacgatcaccaattatgggaaact
accatggatccggaacaccgcttaatggctcgtgtaacagttgatgatgctgcagaagct
gataaagtattcgacatgttaatgggtgatcgtgttgagccaagacgtgagttcattgag
gaaaatgcggtctatagtacgcttgatatttag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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