KEGG   Streptococcus parauberis: STP_1047
Entry
STP_1047          CDS       T01504                                 
Symbol
dnaH
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
stk  Streptococcus parauberis
Pathway
stk03030  DNA replication
stk03430  Mismatch repair
stk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:stk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    STP_1047 (dnaH)
   03430 Mismatch repair
    STP_1047 (dnaH)
   03440 Homologous recombination
    STP_1047 (dnaH)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:stk03032]
    STP_1047 (dnaH)
   03400 DNA repair and recombination proteins [BR:stk03400]
    STP_1047 (dnaH)
Enzymes [BR:stk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     STP_1047 (dnaH)
DNA replication proteins [BR:stk03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     STP_1047 (dnaH)
DNA repair and recombination proteins [BR:stk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     STP_1047 (dnaH)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNA_pol3_gamma3 RuvB_N AAA_22 AAA_30 TIP49 AAA_5 AAA_assoc_2 AAA_14 AAA_19 AAA_7 AAA_2 AAA_24 FlxA DUF6779 AAA_18 AAA_16 Rad17 DnaX_C LPP Sigma54_activ_2 Glyco_tranf_2_5 RNA_helicase PIF1 Spc24
Other DBs
NCBI-ProteinID: AEF25495
Position
complement(1116852..1118528)
AA seq 558 aa
MYQALYRKYRSQTFDEMVGQSVISTTLKQAVESKKISHAYLFSGPRGTGKTSAAKIFAKA
MNCPNQVNGEPCNNCDICHDITNGSLEDVIEIDAASNNGVDEIREIRDKSTYAPSRANYK
VYIIDEVHMLSTGAFNALLKTLEEPTENVVFILATTELHKIPATILSRVQRFEFKSIKQK
DIKAHLMHILTLENIPFEEEALGLIARRAEGGMRDALSILDQALSLSPDDQITLSIAEEI
TGSISILALDDYVANIINQEAQAALSNLETIFDNGKSMSRFATDLLAYFRELLMVQSGAE
SSYQTEHFADNLAVPRETIFQMIAIITKHVPEIKRGSHPRIYAEMMTIELAHLSPVQNSA
SDDNHLSAEINALKMQVDQLKEQLESLSSGEVAPVTTKAKPVSKKTFTYKVDRQKILTIM
EETVQDSEQSRQYLDSLKSVWNEILDSISPQDRALLLGSEPVLANSENAILAFEAAFNAE
QAMNRTDLNDMFGNIMSKAAGFTPHILAVPRSDFNHIRSEFAKKMKDKSPVQVNKAEEES
FLPPEFDFLSEKIKQVED
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgtatcaagccctatatcgcaaatacagaagccaaacctttgatgaaatggttggccaa
tctgtcatctcgacaaccttgaaacaggctgttgaatccaaaaaaattagccatgcctat
ctcttttctggaccaaggggaacaggtaaaaccagtgcagcaaagatttttgctaaggca
atgaactgtccgaaccaagtcaatggagagccttgtaataactgtgatatttgtcatgat
attacaaatggtagtttagaagatgtcattgaaattgatgcagcctcaaacaatggtgtg
gatgaaatccgtgaaattcgtgataaatcaacttatgcaccgagtcgtgcaaactataaa
gtttatatcattgatgaagtgcacatgctatcaacgggtgcatttaatgctttattaaaa
accttggaggaaccaactgaaaatgttgttttcatcctcgcaaccactgaacttcacaaa
attccggcaacgattctgtctcgtgttcaacgttttgaattcaaatcaattaaacaaaaa
gatatcaaggctcatttgatgcatatcttgactttggaaaatattccttttgaagaagaa
gctttaggattaattgcgagacgcgctgaaggtggaatgcgtgatgccctgtcaatttta
gaccaggcacttagtttatccccagatgatcagatcacattatcaattgcagaagagatt
actgggtctatcagcattctggctttagatgactatgtggcaaatataattaaccaagaa
gcacaggctgctctttctaatttagagactatttttgataatggtaaaagtatgagtcgt
tttgcgacggacttattagcctatttcagagaactattaatggttcaaagtggtgctgag
agtagttatcaaacagagcattttgcggataatttagcagttcctcgcgaaactattttt
cagatgattgcgattattactaaacatgttccagaaataaaacggggttcacatcctcgt
atttatgcagaaatgatgaccattgaattggctcaccttagtcctgttcagaattcagct
tcagacgataatcacttatcagctgaaatcaatgccttaaagatgcaagtcgaccaatta
aaagagcaacttgaatcgttatcatctggtgaagttgcacccgttacaaccaaagctaaa
ccagtttccaagaaaacttttacttataaagttgatcgtcaaaagattttaacaattatg
gaagaaaccgttcaagatagtgagcagtctagacaatacttagattctttgaaatcagtt
tggaatgaaatcttggatagtatttctccacaggatagagctttgttgcttggttctgaa
ccagttttggctaacagtgagaatgctattcttgcatttgaggctgccttcaatgcagaa
caagccatgaaccgaacagatttaaatgatatgtttggtaatattatgagcaaagcagct
ggtttcacaccacatattttagctgtccctcgatcagattttaatcacattcggagtgaa
tttgctaaaaaaatgaaagacaaatctccagtacaggtaaacaaagcggaggaggaatca
tttcttccaccagaatttgatttcctgtctgaaaaaataaaacaggtagaagattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (26)   
   Pfam (26)   
All databases (38)   

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