KEGG   Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM0451
Entry
STM0451           CDS       T00065                                 
Symbol
hupB
Name
(RefSeq) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
stm  Salmonella enterica subsp. enterica serovar Typhimurium LT2
Brite
KEGG Orthology (KO) [BR:stm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:stm03032]
    STM0451 (hupB)
   03036 Chromosome and associated proteins [BR:stm03036]
    STM0451 (hupB)
   03400 DNA repair and recombination proteins [BR:stm03400]
    STM0451 (hupB)
DNA replication proteins [BR:stm03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    STM0451 (hupB)
Chromosome and associated proteins [BR:stm03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    STM0451 (hupB)
DNA repair and recombination proteins [BR:stm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      STM0451 (hupB)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 NolB SeleniumBinding HU-CCDC81_euk_1
Other DBs
NCBI-GeneID: 1251971
NCBI-ProteinID: NP_459447
UniProt: P0A1R8
Position
508106..508378
AA seq 90 aa
MNKSQLIEKIAAGADISKAAAGRALDAIIASVTESLKEGDDVALVGFGTFAVKERAARTG
RNPQTGKEITIAAAKVPSFRAGKALKDAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaataaatctcaactgatcgaaaaaattgctgcaggggctgatatctctaaggctgcg
gctggacgtgcgttagatgcgattattgcttctgttaccgaatctctgaaagaaggggat
gacgttgcactggtaggctttggtacttttgctgttaaagagcgtgctgcccgtactggt
cgcaacccgcaaacaggtaaagagatcaccatcgccgctgccaaagtgccgagtttccgt
gcaggtaaagcgctgaaagacgcggtaaactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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