KEGG   Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM1229
Entry
STM1229           CDS       T00065                                 
Symbol
ycfD
Name
(RefSeq) 50S ribosomal protein L16 arginine hydroxylase
  KO
K18850  50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
Organism
stm  Salmonella enterica subsp. enterica serovar Typhimurium LT2
Brite
KEGG Orthology (KO) [BR:stm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:stm03009]
    STM1229 (ycfD)
Enzymes [BR:stm01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.47  [50S ribosomal protein L16]-arginine 3-hydroxylase
     STM1229 (ycfD)
Ribosome biogenesis [BR:stm03009]
 Prokaryotic type
  ribosomal protein modification factors
   STM1229 (ycfD)
SSDB
Motif
Pfam: JmjC_2 ROXA-like_wH Cupin_1 Cupin_2 AraC_binding
Other DBs
NCBI-GeneID: 1252747
NCBI-ProteinID: NP_460199
UniProt: Q8ZPZ7
Position
complement(1316014..1317135)
AA seq 373 aa
MEYQLTLNWPDFLERHWQKRPVVLKRGFSNFIDPLSPDELAGLAMESEIDSRLVSHQDGK
WQVSHGPFESYDHLGESNWSLLVQAVNHWHEPTAALMRPFRALPDWRIDDLMISFSVPGG
GVGPHLDQYDVFIIQGTGRRRWRVGEKLQMRQHCPHPDLLQVEPFEAIIDEELEPGDILY
IPPGFPHEGYALENAMNYSVGFRAPNSRELISGFADYVLQRELGNTYYSDPDMPSRKHPA
DILPQEMDKLRNMMLDLINQPAHFQQWLGEFLSQSRHELDIAPPEPPYQPDEIYDALKQG
EVLVRLGGLRVLRIGDEVYANGEKIDSPHRPALEALASHIALTAENFGDALEDPSFLAML
AALVNSGYWFFEG
NT seq 1122 nt   +upstreamnt  +downstreamnt
atggaataccaattaactcttaactggcccgactttcttgaacgccactggcaaaaacgc
ccggtggtcttaaaacgtgggtttagcaactttatcgatccgctctcgccggatgagctg
gcggggctggcgatggaaagcgaaatcgacagccgactcgttagccatcaggatggcaaa
tggcaggtcagccatggtcctttcgaaagctacgatcatctgggtgagagcaactggtcg
ctgctggtacaggcggtaaaccactggcacgaacccaccgccgcgttgatgcgcccgttc
cgcgctctgccggactggcgtatcgacgatctgatgatctccttttccgttcccggcggc
ggcgttggcccgcatctggatcagtatgatgtgtttattatccagggaaccggtcgccgt
cgctggcgcgtgggcgaaaagctgcaaatgcgtcagcactgcccacatcccgacctgtta
caagtcgaaccgttcgaggccattattgatgaagagctggagccgggcgacattctgtat
attccgccaggattcccgcatgaaggctatgcgctggaaaacgccatgaactattcggtc
ggttttcgcgcgcccaatagccgtgagctgatcagcggttttgccgattacgtcctgcaa
cgggagttgggcaatacatactacagcgatccggatatgccgtcccgcaagcatccggcg
gatatcctgccgcaggagatggataaactgcgtaatatgatgctcgatttgatcaatcaa
cccgcgcatttccaacagtggcttggcgagtttctctctcagtcacgccacgaactggat
attgcgccgccggagccgccgtatcagcctgatgaaatttacgatgccttaaagcaaggc
gaggtattagtacgtctcggcgggcttcgcgtattgcgtatcggcgatgaggtctatgcg
aatggcgaaaaaatagactctccgcatcgccccgctctggaggcgctcgccagtcatatt
gcactgaccgctgaaaacttcggcgatgcgctggaagacccgtccttcctcgcgatgctg
gcggcgctggtgaatagcgggtactggttcttcgaaggataa

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