KEGG   Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM1339
Entry
STM1339           CDS       T00065                                 
Symbol
himA
Name
(RefSeq) integration host factor subunit alpha
  KO
K04764  integration host factor subunit alpha
Organism
stm  Salmonella enterica subsp. enterica serovar Typhimurium LT2
Brite
KEGG Orthology (KO) [BR:stm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:stm03032]
    STM1339 (himA)
   03036 Chromosome and associated proteins [BR:stm03036]
    STM1339 (himA)
   03400 DNA repair and recombination proteins [BR:stm03400]
    STM1339 (himA)
DNA replication proteins [BR:stm03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    STM1339 (himA)
Chromosome and associated proteins [BR:stm03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    STM1339 (himA)
DNA repair and recombination proteins [BR:stm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      STM1339 (himA)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-DNA_bdg
Other DBs
NCBI-GeneID: 1252857
NCBI-ProteinID: NP_460305
UniProt: P0A1S0
Position
1419060..1419359
AA seq 99 aa
MALTKAEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENGEQVKLSGFGNFDLRDKNQR
PGRNPKTGEDIPITARRVVTFRPGQKLKSRVENASPKEE
NT seq 300 nt   +upstreamnt  +downstreamnt
atggcgcttacaaaagctgaaatgtcagaatatctgtttgataagcttgggcttagcaag
cgggatgccaaagaactggttgaactgtttttcgaagagatccgtcgtgctctggaaaac
ggtgagcaggtgaaactctctggttttggtaacttcgatctgcgtgataaaaatcaacgt
ccggggcgtaacccgaaaacgggtgaagatattcctattacagcacggcgcgtggtgacc
ttcagacccgggcagaagttaaagagccgggtcgaaaacgcttcgcccaaagaagagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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