KEGG   Sulfurisphaera tokodaii: STK_02100
Entry
STK_02100         CDS       T00062                                 
Symbol
fen-1
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
sto  Sulfurisphaera tokodaii
Pathway
sto03030  DNA replication
sto03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sto00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    STK_02100 (fen-1)
   03410 Base excision repair
    STK_02100 (fen-1)
   03450 Non-homologous end-joining
    STK_02100 (fen-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sto03032]
    STK_02100 (fen-1)
   03400 DNA repair and recombination proteins [BR:sto03400]
    STK_02100 (fen-1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sto04147]
    STK_02100 (fen-1)
DNA replication proteins [BR:sto03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    STK_02100 (fen-1)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     STK_02100 (fen-1)
DNA repair and recombination proteins [BR:sto03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     STK_02100 (fen-1)
Exosome [BR:sto04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   STK_02100 (fen-1)
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc Sigma70_r1_1 DUF2161 DUF3231
Other DBs
NCBI-ProteinID: BAK54195
UniProt: Q976H6
Position
233806..234861
AA seq 351 aa
MDLAELVEEIKKELSFAELKGKKISIDAYNALYQFLAAIRQPDGTPLMDSQGRVTSHLNG
LFYRTISILEEGIIPIYVFDGKPPEQKAQELERRKKVKEEAEKKLEQAKTEGSIKTSELK
KYAQMSIRLTNEMAEESKELLKAMGIPVVQAPSEGEAEAAYINILGLSWATASQDYDSLL
FGAKRLIRNLTLSGKRKLPGKDVYVEIKPELIELDTLLKKLGLTREQLIDIGIIVGTDYN
PDGIKGYGVKTAYRIIKKYGSLEKAIEKGEIPKIKVNFNVEEIRSLFLKPQVVEPKENLE
LVDCDSNKILDILVKTHDFNEERVKNGIERLEKAKREAKGASRQTGLDQWF
NT seq 1056 nt   +upstreamnt  +downstreamnt
gtagatcttgctgagcttgttgaagagataaaaaaggaactatctttcgctgaacttaaa
ggaaagaaaataagtattgatgcatataatgccctttatcaatttttggctgcgataaga
caaccagatggaacaccattaatggatagtcaaggaagagtaactagtcatcttaatgga
ttattttataggactataagtattctggaggagggaattatacccatttatgtttttgat
ggaaaaccaccagaacaaaaagctcaagaattagaacgaagaaaaaaagtaaaagaagaa
gctgaaaagaagttagagcaagccaaaacagaaggaagtataaagactagtgagttaaaa
aaatatgctcaaatgagtattagacttactaacgaaatggctgaagaaagcaaggaatta
ctgaaagctatgggaattccagtagttcaagcaccttcagaaggtgaagcagaggcagca
tatataaatattttaggcttaagttgggcaactgcaagccaggactatgactccctttta
tttggtgctaaaaggttaataagaaatcttactttaagtggtaaaaggaaacttccggga
aaagatgtatatgtagagattaaaccagaactaatagaactagatactttattaaaaaaa
ctgggtttaactagagaacaattaatagacattggcattatagttggaacagattataac
ccagatggaattaaaggctatggcgttaaaaccgcatatagaattattaaaaaatatggt
agtttagaaaaagcaatagaaaaaggagaaataccaaaaattaaagtcaattttaacgtc
gaagagataagaagtctattcctaaaaccacaagtagtagagcctaaggaaaatcttgaa
ttagtagattgtgatagtaataaaatattagatatcctagttaaaacgcacgattttaac
gaggaaagagtaaaaaacgggatagagagattagaaaaagcaaagagagaagcaaaagga
gcttctcgtcagactggacttgatcaatggttttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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