KEGG   Sulfurisphaera tokodaii: STK_03870
Entry
STK_03870         CDS       T00062                                 
Symbol
pcnA
Name
(GenBank) DNA polymerase sliding clamp A
  KO
K04802  proliferating cell nuclear antigen
Organism
sto  Sulfurisphaera tokodaii
Pathway
sto03030  DNA replication
sto03410  Base excision repair
sto03420  Nucleotide excision repair
sto03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sto00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    STK_03870 (pcnA)
   03410 Base excision repair
    STK_03870 (pcnA)
   03420 Nucleotide excision repair
    STK_03870 (pcnA)
   03430 Mismatch repair
    STK_03870 (pcnA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sto03032]
    STK_03870 (pcnA)
   03400 DNA repair and recombination proteins [BR:sto03400]
    STK_03870 (pcnA)
DNA replication proteins [BR:sto03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    STK_03870 (pcnA)
DNA repair and recombination proteins [BR:sto03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     STK_03870 (pcnA)
   MMR (mismatch excision repair)
    Other MMR factors
     STK_03870 (pcnA)
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    STK_03870 (pcnA)
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad1 Rad9 Alfin
Other DBs
NCBI-ProteinID: BAK54261
UniProt: Q975N2
Structure
Position
complement(401910..402647)
AA seq 245 aa
MHIVYDDVRDLKAIIQALLKLVDEALFDIKPEGIQLVAIDKAHISLIKIELPKEMFKEYD
VPEEFKFGFNTQYMSKLLKAAKRKEEIIIDADSPEVVKLTLSGALNRVFNVNNIEVLPPE
VPEVNLEFDIKATINASGLKNAIGEIAEVADTLLISGNEEKVVVKGEGENKVEVEFSKDT
GSLADIEFNKESSSAYDVEYLNDIISLTKLSDYVKVAFADQKPMQLEFNMEGGGKVTYLL
APKLS
NT seq 738 nt   +upstreamnt  +downstreamnt
atgcatatagtttacgatgacgtaagggatctgaaggctattattcaggctttgcttaaa
ttggttgacgaggctctgtttgacataaaacctgaaggaatacaacttgtagctatagat
aaagctcatatttctttaataaaaatagaacttcctaaagaaatgtttaaagaatatgat
gtaccagaagaattcaagtttggatttaatacacaatatatgagcaaacttttaaaggca
gctaaaagaaaagaggagataattatagatgcagattctccagaagttgtaaagctcact
ttaagtggtgcattaaatagggtatttaacgtaaataacatagaagtattgccaccagag
gtacccgaagtcaatttagaatttgatattaaagccacaattaatgccagtggtttaaag
aatgcaataggcgaaatagccgaagtagcagatacactattaatttcaggtaacgaagaa
aaggttgtagttaagggtgaaggcgaaaataaagtagaagtagaattctcaaaagataca
ggaagtcttgcagacatagaatttaataaggaatcttcttctgcatatgacgtcgaatat
ctaaatgatattatatctcttacgaagctatcagattacgtcaaggtagcatttgcggat
caaaaacctatgcagttggaattcaacatggaaggaggggggaaagttacttatttgctt
gcccccaaattatcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system