KEGG   Sulfurisphaera tokodaii: STK_09510
Entry
STK_09510         CDS       T00062                                 
Symbol
ligT
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
sto  Sulfurisphaera tokodaii
Brite
KEGG Orthology (KO) [BR:sto00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sto03016]
    STK_09510 (ligT)
Enzymes [BR:sto01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     STK_09510 (ligT)
Transfer RNA biogenesis [BR:sto03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    STK_09510 (ligT)
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS
Other DBs
NCBI-ProteinID: BAK54421
UniProt: F9VNR3
Position
924633..925220
AA seq 195 aa
MIRLFTAVDIPQFPKVLEFMEAVKRTGADVKLVEPYNIHITLVFIGEIQENKLDLVKEAV
ARIDFQSFKIKLKGAGAFPNLSRPRVVWIGIEGGLQQLRTIRGNLLKELLARGIRPEDEK
EFTPHLTIGRVKGPSNMMNLVNVINEYQNIEFGEIIVNKIILFKSTLTPKGPIYDPLLEV
TSNDNRGGSSKENKT
NT seq 588 nt   +upstreamnt  +downstreamnt
ttgatcaggctatttacagcagttgatattcctcagtttcctaaagttcttgaatttatg
gaagctgttaaaaggactggcgctgatgtaaaacttgttgaaccatacaatatacatata
actcttgtttttatcggcgaaatccaggaaaataaattagatttagtaaaagaagctgtt
gctagaatagattttcaatccttcaaaataaaactaaaaggagctggtgcatttcctaat
ttatctagacctagagtagtttggataggaattgaaggaggattacagcaattaaggaca
ataagaggtaacttattgaaagaattactagctcgaggcattagaccagaagatgaaaaa
gaatttacccctcacttgacaattggcagagttaaaggtccttcaaatatgatgaattta
gttaatgtgattaatgagtatcagaatatagagtttggagaaattatcgttaataagata
attttatttaagagtaccttaacacctaaaggaccaatatatgacccattactagaagtg
acctctaatgacaatagaggaggaagttctaaagagaataaaacctag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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