KEGG   Salinispora tropica: Strop_4491
Entry
Strop_4491        CDS       T00504                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
stp  Salinispora tropica
Pathway
stp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:stp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Strop_4491
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:stp03400]
    Strop_4491
Enzymes [BR:stp01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Strop_4491
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Strop_4491
DNA repair and recombination proteins [BR:stp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Strop_4491
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS zf-TFIIB NFACT_N
Other DBs
NCBI-ProteinID: ABP56919
UniProt: A4XDB2
Position
5081038..5081898
AA seq 286 aa
MPELPEVEALTVYLRQRAVGRRVDRLEISAINALKTYDPAITAAAGQPVVHAQRHGKFLD
LVLGADLHLVVHLARAGWLHFREEFSSRTPLRPGKGPVALRARLDDGSGFDLTEAGTQKS
LAVYLVTDPATVPGVARLGPDALAVDPATFADRLRSRKGQVKGVLTDQTVLAGVGNAYSD
EILHTARLSPFALTTRLTDEQLATLHAATRDVLGDAVSRSVGQRAAELKGEKRSGLRVHA
RTGLPCPVCGDTVREVSFADSSLQYCPGCQTGGKPLADRRLSRIVR
NT seq 861 nt   +upstreamnt  +downstreamnt
gtgcccgaactaccagaggtggaggcgctcaccgtctacctgcgccaacgcgccgtcggc
cgacgggtcgaccggctggagatctcggcgatcaacgccctgaagacgtacgacccggcg
atcacggccgcggccggccaaccggtcgtccacgcccagcgacacggcaagttcctcgac
ctggtgctcggcgctgacctgcacctggtcgttcacctggcccgcgccggctggctgcac
ttccgggaggagttctcgtcccgcaccccgctgcgccccggcaagggcccggtggcgctg
cgggcccgtctcgacgacggctccgggttcgacctgaccgaggccggcacccagaagagt
ctcgccgtctacctggtgaccgatccggcgacggtgcccggggtggcccgacttggtccg
gacgcgctcgccgtggacccggccaccttcgccgaccggctccgtagccgcaagggtcag
gtcaagggggtgctcaccgatcagacggtgctcgccggggtgggtaacgcgtactctgat
gagatcctgcacacggcgcgactgtcaccgttcgcgctgaccacccggctgaccgacgaa
caactcgccaccctgcacgcggccacccgggacgtgctcggcgacgcggtgtcccgatcg
gtggggcaacgggccgcggagctcaagggcgagaagcgctccggcctgcgggtgcacgcc
cgaaccgggttaccctgcccagtctgcggcgacacggtacgggaggtctcgttcgctgac
tccagcctccagtactgtccaggttgccagaccggcgggaagccactcgcggaccgacgg
ttgtctcgaattgtacggtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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