KEGG   Sebaldella termitidis: Sterm_1226
Entry
Sterm_1226        CDS       T01123                                 
Name
(GenBank) excinuclease ABC, B subunit
  KO
K03702  excinuclease ABC subunit B
Organism
str  Sebaldella termitidis
Pathway
str03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:str00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Sterm_1226
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:str03400]
    Sterm_1226
DNA repair and recombination proteins [BR:str03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Sterm_1226
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Sterm_1226
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII DEAD UVR AAA_22 AAA_5 AAA_30 Kinesin DUF87 AAA_16
Other DBs
NCBI-ProteinID: ACZ08094
UniProt: D1AH60
Position
1334263..1336236
AA seq 657 aa
MDFKIHSDFKPTGDQPEAIEKIVENLENGVSDQILLGVTGSGKTFTVANVIERLNRPALI
MAPNKTLAAQLYNEYKQFFPDNAVEYFVSYYDYYQPEAYVAVTDTYIEKDSSINDEIDKL
RHAATAALLNRRDVIIVASVSAIYGLGSPEAYKKRSIPIDVSVGFDRNDLILRLVDLRYE
RNDYAFERGKFRVNGDVVDLYPTYQDTGYRFEFFGDDLEDISEINTLTGQKIRKIQRISI
MPATHYLSTEDSETMFREIKSELDERIEFFNKKNMLLEAQRIKQRTEYDLEMIAEIGFCK
GIENYSRYLTGKGPGETPDTLIDYFPKDLVVFLDESHISVPQINGMYKGDRARKQSLIDN
GFRLPSAFDNRPMRFEEFFEKTPQVVYISATPGDYEMEQSKSEVIEQLVRPTGIVEPTIE
VRPTKNQIDDLMDEIKLRVEKGERVLVTTLTKKMAEELTDYYLEYGLKVKYMHSDIETLE
RIEIIRGLRRGEFDVLVGINLLREGLDIPEVALVAILEADKEGYLRSRRSLIQTMGRAAR
NVEGKVILYADRITGSMKEAMDEVERRREIQIEYNKEHNINPKTIVSKISDSIVDYEIGN
EEKVDRIKKIYKDKKDIEKEIRILEKEIRKLAEELNFEKAIAKRDEMKALKELLLEL
NT seq 1974 nt   +upstreamnt  +downstreamnt
atggattttaagatacattcggactttaagcctaccggagatcagccggaagcaatagaa
aaaatagtggaaaatctggaaaacggagtttccgatcagatacttctcggggttacaggt
tccgggaagacttttacagtggcaaatgtaatagaaagattaaacagacctgcattaatc
atggctccgaacaaaacactcgcagcacagctttataacgaatataagcagttttttcca
gataatgccgtggaatatttcgtatcatattatgattattatcaaccggaagcttatgta
gctgttacggatacctacatagagaaggattcgtcaataaatgacgaaatagataaattg
cggcatgctgctacggcagcccttttgaacagaagagacgttattatagtagcatctgtt
tctgcaatatacggcttaggatcaccggaagcatataaaaaaagatctataccgatagat
gtttctgtgggatttgacagaaatgatctgatactgagacttgtagatctgagatacgaa
agaaatgattatgcattcgaacgtggaaagttcagagttaacggggatgttgtggattta
tatccgacttatcaggatactggatatagatttgagtttttcggggatgatctggaagat
atatcggagataaatacattaacaggacagaaaatcaggaaaattcagagaatttcaata
atgccggcgactcattacctttctacagaggattccgagacaatgttcagggaaataaaa
agtgaactggatgagagaatagaattttttaataaaaaaaatatgcttctggaagcacag
agaataaaacaaagaaccgaatatgatctggaaatgatagcagaaataggtttttgcaag
gggatagagaactattccagatatctgacaggaaaaggtccgggagaaacacccgacact
ctgatagattatttcccaaaagatcttgttgtctttttggatgagtcacatatttccgtt
ccgcagattaacggtatgtataaaggggacagggcaagaaagcagtcattgattgataac
gggttcagacttccaagtgcttttgataacagaccgatgagattcgaggaatttttcgaa
aaaacacctcaggttgtttatatttcagctactccgggagattatgaaatggagcagtca
aagagtgaggtaatagaacagctggtaagacctacgggaatagtggagcctactatagaa
gtaagacctacaaaaaatcagatcgatgatttaatggatgaaataaagctgagagtagaa
aagggcgaaagggtgcttgttaccacacttactaaaaagatggctgaagagcttacggat
tattatctggaatatggtctgaaagtaaaatatatgcattctgatatagaaacactggaa
agaatagagataataagaggactacggagaggggaatttgatgtacttgtggggataaac
cttttgagagagggattggatataccggaagtagcacttgtagctattttggaagctgac
aaggaaggatatctgagatccagaagatcattgatacagactatgggaagagcggcaaga
aacgtagaaggaaaagtaattctttatgcagacagaataacaggatcaatgaaagaagca
atggacgaggtagagagaagacgtgaaattcagatcgaatataataaagaacataatata
aatccaaaaacaattgtaagtaaaatttctgattccattgtggattatgaaataggcaat
gaagaaaaagtagacagaatcaagaagatttacaaggataaaaaagatatagaaaaagag
ataagaattcttgaaaaggaaataagaaaactggctgaggagctgaattttgaaaaggca
atagctaaaagagacgagatgaaggctctgaaagagctgctgctggaattataa

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