KEGG T04265: ASR50

Streptomyces sp. 4F: ASR50_15055

Entry

ASR50_15055       CDS       T04265

Name

(GenBank) DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

strf Streptomyces sp. 4F

Brite

KEGG Orthology (KO) [BR:strf00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:strf03032]
    ASR50_15055
   03400 DNA repair and recombination proteins [BR:strf03400]
    ASR50_15055
Enzymes [BR:strf01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     ASR50_15055
DNA replication proteins [BR:strf03032]
Prokaryotic type
  DNA Topoisomerases
   ASR50_15055
DNA repair and recombination proteins [BR:strf03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      ASR50_15055

SSDB

Motif

Pfam:

Topoisom_bac Toprim_C_rpt Toprim HC2 Toprim_4 Toprim_2

Other DBs

NCBI-ProteinID:

ALV50600

Position

complement(3412645..3415479)

AA seq 944 aa
MSPTSETANGGRRLVIVESPAKAKTIKGYLGPGYIVEASVGHIRDLPNGAAEVPDKYTGE
VRRLGVDVDHDFQPIYVVNADKKAQVKKLKDLLKESDELFLATDEDREGEAIAWHLQEVL
KPKIPVKRMVFHEITKDAIREAVANPRELNQKLVDAQETRRILDRLYGYEVSPVLWKKVM
PRLSAGRVQSVATRLVVERERERMAFRSAEYWDLTGTFSTGRTGDASDPSTLVARLQTVD
GRRVAQGRDFDSLGQLKSANTLHLDEANARALAAALEDTRFAVRSVESKPYRRSPYAPFR
TTTLQQEASRKLGFGAKATMQVAQKLYENGYITYMRTDSTTLSETAVAAARAQVTQLYGA
DYLPPQPRTYAGKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFKLYELIWKRTVASQMK
DATGNSVTVKIGGTSADGRDVEFSASGKTITFHGFLKAYVEGADDPNAELDDRERRLPQV
AEGDALSAEEISVDGHATKPPARYTEASLVKELEEREIGRPSTYASIIGTILDRGYVFKK
GTALVPSFLSFAVVNLLEKHFGRLVDYDFTAKMEDDLDRIARGEARAVPWLKRFYFGEGE
GAGSGAAADAGNGDGDHLGGLKELVTDLGAIDAREVSSFPVGNGIVLRVGRYGPYVERGE
KDTEEHQRADVPADLAPDELTVELAEELLAKPSGDFELGTDPATGHTIVAKDGRYGPYVT
EILPEGTPKTGKNAVKPRTASLFKSMSLDTVTLDDALKLMSLPRVVGVDAEGQEITAQNG
RYGPYLKKGTDSRSLQSEEQLFTITLEEALAIYAQPKQRGRAAAKPPLKELGTDPVSEKP
VVVKDGRFGPYVTDGETNATLRSGDSVETITPERGFELLAEKRAKGPAKKTAKKTAKKTT
AKKAPAKKTAAKKTTAAKKTTAAKKTTAKKTAAKKTAAANGAED

NT seq 2835 nt +upstreamnt +downstreamnt
ttgtccccgaccagcgagaccgcgaacggcggccgccgactcgtcatcgtcgagtcgcct
gccaaggcgaagacgatcaagggctatctcggccccggctacatcgtcgaggcgagcgtc
gggcacattcgcgaccttcccaacggcgctgccgaggttccggacaagtacaccggcgag
gtgcgccgcctcggtgtggacgtcgaccatgacttccagccgatctatgtggtcaacgcg
gacaagaaggcgcaggtcaagaagctcaaggacctgctgaaggagtccgacgaactcttc
ctcgccaccgatgaggaccgcgagggcgaggccatcgcgtggcacctccaggaagtgctc
aagccgaagatcccggtcaagcgcatggtgttccacgagatcaccaaggacgcgatccgg
gaggccgtggccaacccgcgcgagctcaaccagaagctggtcgacgcccaggagacccgc
cgcatcctcgaccgtctctacggctacgaggtctcgccggtcctgtggaagaaggtcatg
ccccggctgtccgccggccgcgtgcagtccgtcgccacccggctcgtggtcgagcgggag
cgcgagcgcatggcgttccgctccgccgagtactgggacctgaccggcaccttctccacc
ggccgcaccggtgacgcgagcgacccgtcgacgctggtcgcccggttgcagacggtcgac
ggacgccgggtcgcgcagggccgcgacttcgactcgctggggcagctgaagagcgcgaac
accctccacctcgacgaggcgaacgcccgcgcgctcgccgccgccctggaggacacgcgg
ttcgcggtccgctcggtcgagtccaagccgtaccgccgctcgccgtacgcgccgttccgt
acgacgacgctgcagcaggaggcgagccgcaagctcggcttcggcgcgaaggccaccatg
caggtcgcgcagaagctgtacgagaacggctacatcacttacatgcgtacggactcgacg
accctgagcgagacggcggtcgccgccgcccgcgcccaggtcacgcagctgtacggagcc
gactacctgccgccccagccgcgcacctacgcgggcaaggtgaagaacgcccaggaggcg
cacgaggcgatccgtccttcgggggaccgtttccgcacgcccgccgagaccggtctgacc
ggcgaccagttcaagctctacgagctgatctggaagcggaccgtcgcctcgcagatgaag
gacgcgaccggcaactccgtcaccgtgaagatcggcggcacatccgccgacggccgggac
gtcgagttcagcgcgtccggcaagaccatcaccttccacggcttcctcaaggcctacgtc
gagggcgccgacgacccgaacgccgagctggacgaccgtgagcgccggctgccgcaggtc
gccgagggcgacgcgctgagcgccgaggagatctcggtcgacgggcacgccaccaagccc
ccggcccgctacaccgaggcgtcgctggtcaaggagctggaggagcgggagatcggccgc
ccgtcgacgtacgcgtcgatcatcggcacgatcctcgaccgcggctacgtgttcaagaag
ggcacggccctggtgccgtcgttcctctccttcgccgtggtcaacctgctggagaagcac
ttcggccggctcgtcgactacgacttcaccgcgaagatggaggacgacctcgaccgcatc
gcgcgcggcgaggcccgcgccgtgccgtggctgaagcgtttctacttcggcgagggcgag
ggcgcgggcagcggcgccgccgccgacgccggcaacggcgacggggaccacctcggcggt
ctcaaggagctggtgaccgacctgggtgcgatcgacgcgcgcgaggtgtcgtcgttcccg
gtgggcaacggcatcgtgctgcgggtcgggcgctacggcccgtacgtcgagcgcggcgag
aaggacaccgaggagcaccagcgtgccgacgtcccggccgacctggcgcccgacgagctg
accgtcgagctggccgaggagctgctcgccaagccgagcggcgacttcgagctgggcacg
gacccggcgaccgggcacacgatcgtcgccaaggacggccggtacggcccgtacgtgacg
gagatcctgcccgagggcaccccgaagaccggcaagaacgcggtcaagccgcgcaccgcg
tcgctcttcaagtcgatgtccctggacacggtgacgctcgacgacgcgctgaagctgatg
tcgctgccgcgcgtggtcggcgtggacgccgagggccaggagatcaccgcgcagaacggc
cgctacggcccgtacctgaagaagggcacggactcgcggtcgctgcagtcggaggagcag
ctcttcaccatcacgctggaggaggctctggcgatctacgcccagcccaagcagcgtggc
cgggccgcggccaagccgccgctgaaggagctgggcaccgacccggtcagcgagaagccg
gtcgtggtgaaggacggccgcttcggcccgtacgtcaccgacggcgagaccaacgcgacg
ctgcgctcgggcgacagcgtggagacgatcacgccggagcgcgggttcgagctgctggcc
gagaagcgcgccaaggggcccgcgaagaagacggcgaagaagaccgccaagaagacgacg
gccaagaaggccccggccaagaagacggcggcgaagaagacgaccgcggcgaagaagacc
acggccgccaagaagacgacagcgaagaagaccgccgccaagaagacggccgcggcgaac
ggcgcggaggactga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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