KEGG T04265: ASR50

Streptomyces sp. 4F: ASR50_28975

Entry

ASR50_28975       CDS       T04265

Name

(GenBank) DNA-3-methyladenine glycosylase

K13529

AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]

Organism

strf Streptomyces sp. 4F

Pathway

strf03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:strf00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    ASR50_28975
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:strf03000]
    ASR50_28975
   03400 DNA repair and recombination proteins [BR:strf03400]
    ASR50_28975
Enzymes [BR:strf01000]
3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     ASR50_28975
Transcription factors [BR:strf03000]
Prokaryotic type
  Helix-turn-helix
   AraC family
    ASR50_28975
DNA repair and recombination proteins [BR:strf03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     ASR50_28975

SSDB

Motif

Pfam:

AlkA_N Ada_Zn_binding HTH_18 HhH-GPD HTH_AraC DUF6233

Other DBs

NCBI-ProteinID:

ALV54654

Position

6551926..6553428

AA seq 500 aa
MHTDTERCVRAVQSKDARFDGWFYTAVLTTGIYCRPSCPAVPPRPEHMVFHPSAAACQQA
GFRACKRCRPDTSPGSPEWNVRADLVARAMRLIADGVVDREGVTGLAARLGYSTRQIERQ
LLAELGAGPLALARAQRAQTARLLVETTNLPMVDVAFAAGFSSVRTFNDTVREVFALSPS
ELRARAPKHAAAATPGVITLRLPFRAPLHPDNLFGHLAATAVPGVEEWLPHSLEGVGGTP
IGAYRRTLRLPYGHGIVALAPRPDHIACRLALSDPRDLTVAISRCRRLLDLDADPAAVDE
QLRADPALAPLVDKAPGRRVPRTVDEAEFAVRAVLGQQVSTAAARTHAARLVTAHGTSVD
DPEGGLTHLFPTPEHLAALDPDALAMPRTRRTTLTTLVRRLADGDLRLGADSDWPETRAA
LLALPGFGPWTADVIAMRALGDPDAFLPTDLGVRRAAQALGLPSTPSALTTRAAAWRPWR
AYAVQYLWATDSHPINVLPA

NT seq 1503 nt +upstreamnt +downstreamnt
atgcacaccgacaccgagcgctgcgtgcgcgccgtgcagtcgaaggacgcgcggttcgac
ggctggttctacaccgccgtcctcaccaccggcatctactgccggcccagctgcccggcc
gttccgcccaggcccgagcacatggtgttccacccgagcgccgccgcctgccagcaggcc
gggttccgggcgtgcaaacgctgccgccccgacaccagccccggctcacccgagtggaac
gtgcgcgccgacctcgtcgcccgcgccatgcggctcatcgccgacggcgtcgtggaccgc
gaaggtgtcaccgggctcgccgcccgcctcggctacagcacccggcagatcgaacgccag
ctgctcgccgaactcggcgcgggccccctcgccctggcccgcgcccagcgggcgcagacg
gcgcggctgctcgtcgagacgaccaacctgccgatggtggacgtcgccttcgcggccggc
ttctcctccgtacgcaccttcaacgacaccgtgcgcgaggtgttcgcgctctcccccagc
gagctgcgcgcccgggcgccgaaacacgcggccgccgccacgcccggagtgatcacgctg
cgcctgccgttccgcgccccgctccaccccgacaacctcttcggccacctcgccgccacc
gccgtccccggagtggaggagtggctcccccacagcctcgagggcgtgggaggtaccccc
atcggcgcctaccgccggaccctgcgcctcccgtacggccacggcatcgtcgccctggcc
ccgcgccccgaccacatcgcctgccggctcgccctgagcgacccgcgggacctgaccgtc
gccatcagccgctgccgccgcctgctggatctcgacgccgacccggccgccgtcgacgag
caactgcgcgccgaccccgcgctcgcgcccctggtcgacaaggcgcccggccgccgggtg
ccgcgcacggtcgacgaggcggagttcgccgtccgcgcggtcctcggacagcaggtgtcc
acggccgccgcccgcacccacgccgcccgcctggtcaccgcgcacggcacttccgtcgac
gaccccgagggcggcctcacccacctcttcccgacgccggagcacctggccgccctcgac
ccggacgccctcgccatgccccgcacccgccgcaccaccctgaccaccctggtccggcgg
ctcgcggacggcgatctccgcctcggcgccgacagcgactggccggagacccgcgccgcg
ctcctcgccctccccggcttcggcccctggaccgccgacgtcatcgccatgcgcgccctc
ggcgaccccgacgccttcctccccaccgacctgggcgtccgccgcgcggcccaggccctg
ggactcccctccaccccgtccgccctcaccactcgggccgccgcctggcgcccctggcgc
gcgtacgccgtccagtacctctgggcgaccgacagccacccgatcaacgtcctgccggcc
tga

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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