KEGG   Peterkaempfera bronchialis: C7M71_021950
Entry
C7M71_021950      CDS       T05561                                 
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
stri  Peterkaempfera bronchialis
Brite
KEGG Orthology (KO) [BR:stri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:stri03016]
    C7M71_021950
Enzymes [BR:stri01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     C7M71_021950
Transfer RNA biogenesis [BR:stri03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    C7M71_021950
 Prokaryotic type
    C7M71_021950
SSDB
Motif
Pfam: TruB_N TruB_C TruB_C_2 PseudoU_synth_2 DKCLD
Other DBs
NCBI-ProteinID: AXI79671
UniProt: A0A345T116
Position
4922320..4923219
AA seq 299 aa
MKRKGTGPDGLVIVDKPAGITSHGVVARMRRLAGTRRVGHAGTLDPMATGVLVIGVEKAT
RLLGHLMLTDKTYEATIRLGRTTVTDDAEGEVTATVSAEGVTPEAVAAGVAALTGEILQV
PSKVSAIKIDGKRSYALVRDGEEVELKARPVTVSRFTVHGQRPATAEDGTPLLDLDVTVD
CSSGTYVRALARDLGASLGVGGHLTALRRTRVGPYTLEQAHTLEQLEESFTHLPIGEAAA
AAFPRWDIGEDQARLLVNGVRLKSPGLEPGPVAVFGPEERFLALVEEKHGQARPLAVFA
NT seq 900 nt   +upstreamnt  +downstreamnt
atgaagcgcaagggaaccggccccgacggcctggtcatcgtcgacaagcccgccggcatc
acctcccacggcgtggtcgcccggatgcgccgcctcgcgggcacccgcagggtcggccac
gccggcaccctcgacccgatggcgaccggagtgctggtcatcggcgtggagaaggccacc
cggctgctcggccacctgatgctgaccgacaagacctacgaggccaccatccggctgggc
cggaccacggtcaccgacgacgccgagggcgaggtcaccgccaccgtctccgccgagggg
gtcaccccggaggcggtcgcggccggggtcgccgcgctcaccggcgagatcctccaggtg
ccgtccaaggtcagcgccatcaagatcgacggcaagcggtcctacgccctggtccgggac
ggcgaggaggtcgagctgaaggcccggccggtcaccgtctcccggttcaccgtgcacggg
cagcggcccgccacggcggaggacggcaccccgctgctcgacctggacgtcaccgtggac
tgctcctccggcacctatgtccgcgccctcgcccgcgacctcggcgcaagcctgggagtg
ggcggccacctcaccgcgctgcggcgcacccgggtcggcccgtacaccctggagcaggcg
cacaccctggagcagctggaggagtccttcacccatctgccgatcggcgaggccgccgct
gcggccttcccccgctgggacatcggcgaggaccaggcgcggctgctggtcaacggcgta
cggctgaagtcccccggcctggagcccggcccggtcgccgtcttcggccccgaggagcgc
ttcctggcgctggtggaggagaagcacggccaggcccggccactggcggtcttcgcctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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