KEGG   Streptomyces sp. Mg1: M444_02080
Entry
M444_02080        CDS       T03958                                 
Name
(GenBank) ABC transporter
  KO
K03701  excinuclease ABC subunit A
Organism
strm  Streptomyces sp. Mg1
Pathway
strm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:strm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    M444_02080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:strm03400]
    M444_02080
DNA repair and recombination proteins [BR:strm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     M444_02080
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      M444_02080
SSDB
Motif
Pfam: UvrA_DNA-bind ABC_tran DnaJ_CXXCXGXG AAA_29 AAA_16 AAA_21 nSTAND1 AAA_22 AAA_25 AAA_33 DUF4350 MeaB Viral_helicase1 DUF5351 cobW NTPase_1 DUF6510
Other DBs
NCBI-ProteinID: AKL64421
UniProt: B4UXE4
Position
1:complement(445786..448254)
AA seq 822 aa
MNKDATDPFVHVRGASENNLRDIDVDVPRDAMVAFTGVSGSGKSSLAFGTLYAEAQRRYF
ESVAPYARRLLQQVGAPHVQEITGLPPAVALQQRRGSPSSRSTVGTLTTLSNLLRMLYSR
AGTYPPRAARLEAESFSPNTAAGSCPECHGLGVVHDVAEDLLVPDPSLSIREGAIAAWPG
AWQGANLRSVVSGLGIDIDRPWRRLRKKDRDWLLYTDEQPSVYIEPEEDRVDYGYQGKFW
SARKHVMHVLADSKSEKMRERALRFVRSVPCPECHGSGLRPEALAVTFAGRSIAEINAMP
LTEVVGLLRPVAGRSEADATTSTARSGETTEVAVRICGDLVARVDVLLDLGLGYLSLGRR
STTLSPGEAQRLRIATQLRSGLFGVVYVLDEPSAGLHPADAEPLLEVLERLKAAGNSLFV
VEHDMDVVRRADWVVDIGPGAGEGGGRVLYSGPVAGLERVAESATSQYLFGRAEPLAHRP
RTPQGWLHLRGVSRHNLHDVSVDVPLCVLTAVTGVSGSGKSTLVTQVLAEVVRCHLGLVP
EGPDEAQLVVDVQDASGVESFDRLVRVDQRPIGRTPRSNLATYTGMFDAVRKLYAATDEA
KARGYSAGRFSFNVPEGRCETCQGEGFVAVELLFLPGTYAACPTCRGARYNAETLEVTYR
GKNIAEVLGLSVDAAATFLSAVPAASRSLETLREVGLGYLRLGQPATELSGGEAQRIKLA
TELQRARRGHALYLLDEPTAGLHPSDVALLLRQLHRLVDAGNTVVLVEHDLDTITTADWV
IDLGPGGGDAGGRVVAAGPPAKVARARRSATAPYLAARLERS
NT seq 2469 nt   +upstreamnt  +downstreamnt
gtgaacaaggacgcgaccgaccccttcgtgcatgtccggggcgccagtgagaacaacctg
cgggacatcgacgtcgacgtcccgcgggacgcgatggtcgccttcaccggcgtctccggt
tcgggcaagtcctcgctcgcgttcggcacgctctacgcggaggcccagcggcgctatttc
gagtccgtggcaccgtacgcccgaaggctgttgcaacaggtcggtgcaccgcacgtgcag
gaaatcacaggactgccaccggccgtggccctgcagcagcgacgcgggtcgcccagctcg
cgctcgacggtcggcaccctcaccacgctgtccaatctgctgcgcatgctgtactcccgc
gccggcacctatccgccccgggccgcacggctggaagccgagtcgttctcacccaacacc
gcggccggctcctgtccggagtgccacggactgggcgtcgtacacgacgtcgccgaggac
ctgctggtcccggacccctcgctgagcatccgcgagggggcgatcgccgcctggccgggc
gcctggcagggagccaacctgcgcagtgtcgtgagcggcctggggatcgacatcgaccga
ccgtggcgcaggctaaggaagaaggaccgggactggctgctgtacacggacgagcagccc
tccgtgtacatcgagccggaggaggaccgcgtcgactacggctaccagggcaagttctgg
agcgcccgcaagcacgtcatgcacgtcctcgccgactccaagagcgagaagatgcgcgaa
cgggcgctccggttcgtcaggagtgtgccctgccctgagtgtcacggcagcggactgcgg
cccgaggcgctcgccgtgaccttcgccggacgttccatcgccgagatcaacgcgatgccg
ctcaccgaggtcgtggggctgctgcggcccgtcgcggggcggtccgaggccgatgccacc
acatcgacggcccgatccggggagacgaccgaggtcgcggtccggatctgcggcgatctg
gtcgcgcgggtcgacgtactgctcgacctgggcctcggatatctcagcctcgggcgccgc
tcgacgaccctgtcgccaggcgaggcgcagcgcctgcggatcgccacccagctgcgctcg
gggcttttcggcgtcgtctacgtgctcgacgaaccctccgcgggcctgcacccggccgac
gcggaaccgctgctggaagtgctggagcgcctcaaggcggcgggcaactctctgttcgtc
gtggagcacgacatggacgtcgtacggcgggcagactgggtggtcgacatcggccccggc
gcgggcgagggtggtggccgcgtgctgtacagcggcccggtcgccggcctggagcgggtg
gcggagtcggccacgagccagtacctgttcgggcgcgccgaaccgctcgctcaccgcccg
cgcacaccgcagggctggctgcacctgaggggcgtctcccgccacaatctgcacgacgtg
tccgtcgacgtaccgctgtgcgtactgacggcggtgacgggcgtgtccggttccggaaag
tcgacactggtgactcaggtgctcgccgaggtcgtccgctgccacctcggactcgtaccc
gaggggcccgatgaggcgcagctggtggttgacgtccaggacgcgtcgggggtcgagtcg
ttcgaccggctggtccgggtcgaccaacggcccatcggccgaaccccccgttccaacctg
gcgacgtacacggggatgttcgacgcggtgcgcaagctgtacgcggcgacggacgaggcg
aaggcgcgcggctactcggccgggaggttctccttcaacgtgcccgaaggacggtgcgag
acctgccagggcgaagggttcgtcgcggtagaactgctcttcctgccgggcacctacgca
gcgtgcccgacctgccggggtgcccggtacaacgcggaaacgctggaagtcacctaccgc
ggcaagaacatcgcggaggtgctggggttgtccgtcgacgccgccgccacgttcctgtcc
gccgtcccggccgcctcccggagtctggagacgttgcgcgaggtggggctggggtacctg
cggctggggcagcccgcgacggaactcagcggtggtgaggcgcaacgcatcaaactggcc
accgaactgcagcgagcgcgccgcggccacgcgctctacctgctcgacgagccgacggcg
gggctgcacccctcggacgtcgcgctgctgctgcgacagctgcaccggctcgtcgacgcc
ggcaacacggtggtcctcgtcgagcacgacctggacacgatcaccaccgccgactgggtc
atcgacctggggccgggcggcggcgacgcgggcgggcgggtggtcgcggcgggcccgccg
gccaaggtggcgagagcccgccgcagcgccaccgcgccctacctcgcggcccgcctcgag
cgctcctga

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