KEGG   Streptomyces sp. Mg1: M444_23470
Entry
M444_23470        CDS       T03958                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
strm  Streptomyces sp. Mg1
Pathway
strm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:strm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    M444_23470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:strm03021]
    M444_23470
   03019 Messenger RNA biogenesis [BR:strm03019]
    M444_23470
Transcription machinery [BR:strm03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     M444_23470
Messenger RNA biogenesis [BR:strm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     M444_23470
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 AAA NACHT AAA_22 ResIII Spore_III_AA
Other DBs
NCBI-ProteinID: AKL67884
UniProt: A0A0G3UNM1
Position
1:5359596..5361689
AA seq 697 aa
MSDTTDLMGAADTNVDTSAPAAGAAPKRRRSGTGLEGMVLAELQQVASGLGIRGTARMRK
SQLIEVIKETQAGGGSAPKAASTADTAEAKPKRRATSKARTGEAAEQAPASKPAAQAQIE
IPGQPASDDAPAGERRRRRATAPSGSPESSAPAAVQVEQKTETVPAAAAPAETKAEAATA
VSAPQGQEAGEGRGRRDRQGRGERGERGERGDRQSRRERGAKADDQGGQGQGGQGQAGQG
QGQGQGGRQDRADRADRQQQGGRQGQQSRQDRQGPQDNGPQDDFDEDGRRGRRGRYRDRR
GRRGRDEFAPNEPQVADDDVLIPVAGILDILDNYAFIRTSGYLPGPNDVYVSLAQVRKAG
LRKGDHTTGAVRQPKDGERREKFNALVRLDSVNGMAPESGRGRPEFQKLTPLYPQDRLRL
ETDPGVLTTRIIDLVSPIGKGQRGLIVAPPKTGKTMIMQAIANAITTNNPECHLMVVLVD
ERPEEVTDMQRSVKGEVISSTFDRPAEDHTTVAELAIERAKRLVELGHDVVVLLDSITRL
GRAYNLAAPASGRILSGGVDSTALYPPKRFFGAARNIEDGGSLTILATALVDTGSRMDEV
IFEEFKGTGNMELKLDRKLADKRIFPAVDVDPSGTRKEEILLNAEELAIVWKLRRVLHAL
DSQQAIELLLDKMKQTKSNAEFLMQIAKTTPAGKNDD
NT seq 2094 nt   +upstreamnt  +downstreamnt
gtgagcgacaccaccgatctgatgggcgctgccgacaccaacgtcgacaccagtgccccc
gccgcgggcgccgcacccaagcgccgccgctccggcaccggccttgagggcatggtcctg
gccgagctgcagcaggtcgcgtcgggcctcggaatcaggggcaccgcgcggatgcgcaag
agccagctgatcgaggtcatcaaggagacgcaggcgggtggcggcagtgcccccaaggcc
gcctccaccgcggacaccgccgaggccaagccgaagcgccgcgccaccagcaaggcccga
acgggtgaggccgccgagcaggcgcccgcctcgaagcccgccgcgcaggcgcagatcgag
atccccggccagccggccagcgacgacgctccggccggcgagcgccgccgccgtcgggcc
acggccccctccggcagcccggagtcctcggcccccgccgccgtgcaggtcgagcagaag
accgagaccgtgccggccgccgccgcgccggccgagaccaaggccgaggccgccaccgcc
gtctccgccccgcagggccaggaggccggcgagggccgcggccgccgtgaccgccagggc
cgcggcgagcgcggtgagcgcggtgagcgtggcgaccgccagagccgccgcgagcgcggc
gccaaggccgacgaccagggcggccagggccagggcggccagggccaggccggtcagggc
cagggtcagggtcagggcggtcgtcaggaccgcgccgaccgggccgaccgccagcagcag
ggcggccgtcagggccagcagagccgtcaggaccgtcagggtccccaggacaacggcccg
caggacgacttcgacgaggacggccgccgcggccgccgcggccgctaccgcgaccgccga
ggccgtcgcgggcgcgacgagttcgccccgaacgagccgcaggtcgccgacgacgacgtg
ctgatccccgtcgcgggcatcctcgacatcctcgacaactacgcgttcatccggacctcg
ggctacctgcccggcccgaacgacgtgtacgtctccctcgcccaggtccgcaaggccggc
ctgcgcaagggtgaccacaccaccggtgccgtgcgccagcccaaggacggcgagcgccgc
gagaagttcaacgccctggtgcgtctggactcggtgaacggcatggcgcccgaatccggc
cgcggccgcccggagttccagaagctgaccccgctgtacccccaggaccggctccgtctg
gagaccgacccgggcgtgctgacgacccgcatcatcgacctcgtgtcgccgatcggaaag
ggccagcgaggcctgatcgtggccccgccgaagaccggcaagaccatgatcatgcaggcg
atcgccaacgcgatcaccacgaacaaccccgagtgccacctgatggtcgtcctcgtcgac
gagcgtccggaagaggtcaccgacatgcagcggtcggtcaagggcgaggtcatctcctcg
accttcgaccgcccggccgaggaccacaccaccgtcgccgagctggccatcgagcgcgcc
aagcgtctcgtcgagctgggtcacgacgtggtcgtcctgctggactccatcacccgtctg
ggccgcgcgtacaacctcgcggcgcccgcctccggccgcatcctgtccggtggtgtcgac
tcgaccgcgctgtacccgccgaagcgcttcttcggtgccgcgcgcaacatcgaggacggc
ggctcgctgaccatcctggccaccgcgctcgtcgacaccggctcgcgcatggacgaggtg
atcttcgaggagttcaagggcaccggcaacatggagctcaagctcgaccgcaagctcgcc
gacaagcgcatcttcccggccgtcgacgtcgacccgtcgggcacccgcaaggaggagatc
ctcctcaacgcggaggagctcgccatcgtctggaagctgcgccgggtgctgcacgcgctc
gactcgcagcaggcgatcgagctgctgctcgacaagatgaagcagacgaagtcgaacgcc
gagttcctgatgcagatcgcgaagacgaccccggcgggcaagaacgacgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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