KEGG T02619: F750

Streptomyces sp. PAMC 26508: F750_1934

Entry

F750_1934         CDS       T02619

Name

(GenBank) ribosomal large subunit pseudouridine synthase D

K06180

23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]

Organism

strp Streptomyces sp. PAMC 26508

Brite

KEGG Orthology (KO) [BR:strp00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:strp03009]
    F750_1934
Enzymes [BR:strp01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     F750_1934
Ribosome biogenesis [BR:strp03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    F750_1934

SSDB

Motif

Pfam:

PseudoU_synth_2 S4

Other DBs

NCBI-ProteinID:

AGJ54429

Position

complement(1994178..1995119)

AA seq 313 aa
MSTYPEVRTLPVPDGLEGERVDAAISRMFGFSRTKAAELAAAGKVQVDGAVAGKSERVHG
GAWMEVEMPQAPAPVQIVAEPVEGMEIVHDDDDIVVIMKPVGVAAHPSPGWTGTTVIGGL
AAAGYRISTSGAAERQGIVHRLDVGTSGLMVVAKSERAYTLLKAQFRDRVVEKKYHALVQ
GHPDPMSGTIDAPIGRHPQHDYKWAVTAEGKPSVTHYDLIEAYRAASLLDIKLETGRTHQ
IRVHMSAHRHPCVGDLTYGADPTLAKRLGLTRQWLHAVRLGFEHPADGGWVEFESTYPDD
LRHALDTIAAESQ

NT seq 942 nt +upstreamnt +downstreamnt
gtgagtacgtatcccgaggtccgcaccctgcccgtacccgacggcctggagggcgagcgc
gtcgacgccgccatctcccggatgttcggtttctcccgcaccaaggccgccgagctggcc
gcggccgggaaggtgcaggtggacggtgccgtggccgggaagtccgagcgggtgcacggc
ggcgcctggatggaagtggagatgccccaggcacccgctccggtccagatcgtcgccgag
cccgtcgagggcatggagatcgtgcacgacgacgacgacatcgtcgtcatcatgaagccg
gtcggtgtcgccgcccaccccagcccgggctggaccggcaccaccgtcatcggcggcctc
gccgcggccggctaccgcatctcgacgtcgggcgccgccgagcggcagggcatcgtgcac
cggctggacgtcggcacctccggcctgatggtcgtggccaagtccgagcgggcctacacc
ctgctcaaggcgcagttccgcgaccgggtcgtcgagaagaagtaccacgcgctggtccag
ggccacccggatccgatgagcggcaccatcgacgcccccatcggccgccacccccagcac
gactacaagtgggccgtcaccgccgagggcaagccctccgtgacgcactacgacctcatc
gaggcctaccgcgcggccagcctgctcgacatcaagctggagacgggacgcacgcaccag
atccgcgtgcacatgtccgcgcaccgccacccctgcgtcggcgacctgacctacggcgcc
gaccccacgctggccaagcgcctcggcctgacgcgccagtggctgcacgcggtccggctc
ggcttcgagcaccccgccgacggcggctgggtggaattcgagagcacctacccggacgac
ctgcgccacgcactcgacaccatcgcggcggagagccagtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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