KEGG T02619: F750

Streptomyces sp. PAMC 26508: F750_4291

Entry

F750_4291         CDS       T02619

Name

(GenBank) DNA-directed RNA polymerase alpha subunit

K03040

DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]

Organism

strp Streptomyces sp. PAMC 26508

Pathway

strp03020

RNA polymerase

Brite

KEGG Orthology (KO) [BR:strp00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    F750_4291
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:strp03021]
    F750_4291
   03400 DNA repair and recombination proteins [BR:strp03400]
    F750_4291
Enzymes [BR:strp01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     F750_4291
Transcription machinery [BR:strp03021]
Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     F750_4291
DNA repair and recombination proteins [BR:strp03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      F750_4291

SSDB

Motif

Pfam:

RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5

Other DBs

NCBI-ProteinID:

AGJ56732

Position

4461836..4462858

AA seq 340 aa
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY

NT seq 1023 nt +upstreamnt +downstreamnt
atgcttatcgctcagcgtccgtcgctgaccgaagaggtcgtcgacgagttccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggttacaccctcggcaactccctgcgccgc
acgctcctctcctcgatccccggtgccgctgtcaccagcatccggatcgacggtgtcctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtgaccgacctcatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggtcccggcctggtcaccgctgctgacatcgccccgccggccggtgtcgaggtccacaac
ccggacctggtcctggccacgctgaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgccgttcagaacaagcaggtgggccaggagatcggc
cggattccggtcgactccatctactccccggtgctcaaggtcacgtacaaggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcgtccccgtgacgccatggcgtcggccggtaagaccctggtcgagctgttcggt
ctggcgcgcgagctcaacatcgacgccgagggcatcgacatgggcccgtccccgacggac
gccgcgctcgccgccgatctggcgctgccgatcgaggagctcgagctcacggtccgttcg
tacaactgcctcaagcgcgagggcatccactccgtgggtgagctcgtggcccgctccgag
gcggacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggcgaag
ctggccggtatgggcctggcgctgaaggactcgcctcccggcttcgacccgaccgccgcc
gccgacgccttcggcgccgacgacgacgcggacgccggtttcgtggagaccgagcagtac
tga

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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