KEGG   Streptomonospora litoralis: EKD16_08950
Entry
EKD16_08950       CDS       T05863                                 
Symbol
cshA2
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
strr  Streptomonospora litoralis
Pathway
strr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:strr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EKD16_08950 (cshA2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:strr03019]
    EKD16_08950 (cshA2)
   03009 Ribosome biogenesis [BR:strr03009]
    EKD16_08950 (cshA2)
Messenger RNA biogenesis [BR:strr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     EKD16_08950 (cshA2)
Ribosome biogenesis [BR:strr03009]
 Prokaryotic type
  rRNA helicases
   EKD16_08950 (cshA2)
SSDB
Motif
Pfam: DEAD Helicase_C DbpA WSD ResIII
Other DBs
NCBI-ProteinID: QBI53584
UniProt: A0A4P6Q432
Position
complement(2007569..2009314)
AA seq 581 aa
MATDATETAPGFTDLPLRGELLDALSRLGYEEPTPIQREAIPPLVEGRDLLGQAATGTGK
TAAFALPILERMEQDREGLEPMSLVLVPTRELAVQVCEAVHRYGRDLGVRVLPVYGGQPI
GRQIRGLERGVDVVVATPGRALDHLGRGTLSLSGLRMTVLDEADEMFDMGFAEDIEAILE
EIPQDCQTVLFSATMPPRIERMAGGNLTDPVRIQIARETRAVGEAPLVRQSAYVVPRAHK
PAAIGRILDVESPTAAIVFCRTREEVDQLTEVLNGRGHRAEALHGGMSQEQRDRTMGRLR
SGTTDLVIATDVAARGLDVEHLTHVLNYNVPSAPDSYVHRVGRVGRAGREGVAITLVEPR
EHRMLKSIRRATDYTINVEKIPTIADARARRLELTSAALRETLLDEEAEDDREHMRVVVE
SLADEFDVMEVALAAVKLAHESQNPVDDDVEIPEVSIKPEQKDKGRGRRDGGRRDQRGDR
GDRGERGERREQRGGRAPAGGMSRLFIGAGRGARVRPQDLVGAITGESELRGRDIGAIEI
AERFSLVEVPSQAADDVISALQNTTIKGRKTVVRRDAKDVG
NT seq 1746 nt   +upstreamnt  +downstreamnt
atggccaccgacgccaccgaaaccgcccccggtttcaccgacctgccgctgcggggggag
cttctcgacgcgctgtcccggctgggctacgaggagcccactcccattcagcgcgaggcc
attccgccgctggtcgagggccgcgacctgctgggccaggccgccaccggcaccggcaag
acggcggcgttcgcgctgccgatcctggagcgcatggagcaggaccgcgaaggtctggag
ccgatgtcgctggtgctggtgcccacccgggagctggccgtgcaggtctgcgaggccgtg
caccgctacggccgcgacctgggcgtgcgggtcctgccggtctacggcggccagcccatc
ggccgccagatccgcggcctggagcgcggcgtcgacgtggtcgtggcgacgcccggccgc
gcgctggaccacctgggccgcggcacgctgagcctgagcgggctgcggatgacggtgctg
gacgaggccgacgaaatgttcgacatgggcttcgccgaggacatcgaggcgatcctggag
gagatcccgcaggactgccagaccgtgctgttctcggcgaccatgccgccgcgcatcgag
cggatggccggaggcaacctgaccgatccggtgcgcatccagatcgcccgcgagacccgc
gcagtcggcgaggcgccgctggtgcgccaaagcgcctacgtggtgccgcgcgcgcacaag
cccgccgcgatcgggcgcatcctggacgtggagtcgcccacggcagcgatcgtgttctgc
cgcacccgcgaggaggtcgaccagctcaccgaggtgctcaacggccgcggccaccgcgcc
gaggcgctgcacggcgggatgagccaggagcagcgcgaccgcaccatgggccggctgcgc
agcggcaccacggacctggtgatcgccaccgacgtggccgcgcgcgggctcgacgtcgag
cacctgacccacgtgctcaactacaacgtgccttcggccccggactcctacgtgcaccgc
gtgggccgggtcggccgggccgggcgcgagggggtcgccatcaccctggtcgagccgcgc
gaacaccgcatgctgaagagcatccggcgcgccaccgactacacgatcaacgtggagaag
atccccacgatcgccgacgcccgcgcccggcggctggagctgaccagcgccgcgctgcgc
gagaccctgctggacgaggaggccgaggacgaccgcgagcacatgcgggtggtggtggag
tcgctggccgacgagttcgacgtgatggaggtggcgctggcggcggtcaagctggcccac
gagtcgcagaacccggtcgacgacgacgtggagatccccgaggtcagcatcaagcccgag
cagaaggacaagggccgcgggcggcgcgacggcggtcggcgagaccagcgcggagatcgc
ggggaccgcggcgagcggggcgaacgccgcgagcagcgcggcggccgcgcgcccgccggc
gggatgtcgcgcctgttcatcggcgcgggccgcggcgcccgggtgcgcccgcaggacctc
gtcggcgcgatcaccggggagtcggaactgcgcggccgcgacatcggcgcgatcgagatc
gccgagcgcttctccctggtggaggtgccctcgcaagccgccgacgacgtgatctccgcg
ctgcagaacaccaccatcaagggccgcaagacggtggtccgccgcgacgccaaggacgtc
ggctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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