KEGG   Streptomyces sp. SAT1: A8713_26490
Entry
A8713_26490       CDS       T04706                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
strt  Streptomyces sp. SAT1
Pathway
strt03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:strt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    A8713_26490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:strt03400]
    A8713_26490
Enzymes [BR:strt01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     A8713_26490
DNA repair and recombination proteins [BR:strt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     A8713_26490
SSDB
Motif
Pfam: LigD_Prim-Pol DNA_primase_S
Other DBs
NCBI-ProteinID: ANH94292
UniProt: A0A1A9J3A1
Position
6193326..6194249
AA seq 307 aa
MSGSPRTVRAGRRTLEVHRPDKVLFPATAGCPACTKADLVGHYRAVARFMLPHLRGRPLM
LERRPDGLDGPVFMQKNTPAYYPDWITRAEVAKEDGTVTHTVCDDTATLVYLADQACLTP
HRWLSRARAPERPDLMIFDLDPSGDDFAPVREAARLLGTLLDELGLPAALMTTGSRGLHV
TVRLDGRCGFDEVREFARDTAGLLVAGHPDRFTTAARKKDRGERLYLDVQRNGYAQTAVA
PYAVRARPGAPVAIPLSWDQLDDPALGPRRWTVADAVDQARTRPWSGLPARGRALGPARR
RLDALRD
NT seq 924 nt   +upstreamnt  +downstreamnt
gtgagcggaagcccccgcacggtacgggccggccggcgcaccctcgaggtgcaccggccg
gacaaggttctgttcccggccaccgcgggctgccccgcctgcaccaaggccgacctggtc
ggccactaccgcgccgtggcccgcttcatgctgccccacctgcgcggccggccgctgatg
ctggagcgccgcccggacggcctggacggccccgtcttcatgcagaagaacacgcccgcg
tactacccggactggatcacccgcgccgaggtcgccaaggaggacggcaccgtcacgcac
accgtctgcgacgacaccgccaccctggtgtacctcgcggaccaggcgtgcctgaccccg
caccgctggctctcccgggcccgcgcgcccgagcggccggacctgatgatcttcgacctc
gacccgtccggcgacgacttcgcgccggtgcgcgaggcggcccggctgctgggcacgctc
ctggacgagctgggcctgcccgcggccctgatgaccaccgggtcccgcggactgcacgtg
accgtgcgcctcgacgggcggtgcggcttcgacgaggtgcgggagttcgcccgggacacc
gccggactgctggtcgccggccaccccgaccggttcaccaccgcggcccgcaagaaggac
cgcggcgagcggctctacctggacgtccagcgcaacggctacgcccagaccgcggtggcg
ccctacgccgtacgggcccggccgggcgcgcccgtcgcgatacccctctcctgggaccag
ctcgacgacccggcgctcgggccgcggcgctggactgtcgccgacgccgtcgaccaggcc
cgcacgcggccctggtccgggctgcccgcacgcggccgggcgctgggccccgcccggcgg
cggctggatgcgctgcgtgactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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