KEGG   Salmonella enterica subsp. enterica serovar Typhi Ty2: t1001
Entry
t1001             CDS       T00121                                 
Symbol
holE
Name
(GenBank) DNA polymerase III theta subunit
  KO
K02345  DNA polymerase III subunit theta [EC:2.7.7.7]
Organism
stt  Salmonella enterica subsp. enterica serovar Typhi Ty2
Pathway
stt03030  DNA replication
stt03430  Mismatch repair
stt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:stt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    t1001 (holE)
   03430 Mismatch repair
    t1001 (holE)
   03440 Homologous recombination
    t1001 (holE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:stt03032]
    t1001 (holE)
   03400 DNA repair and recombination proteins [BR:stt03400]
    t1001 (holE)
Enzymes [BR:stt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     t1001 (holE)
DNA replication proteins [BR:stt03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     t1001 (holE)
DNA repair and recombination proteins [BR:stt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     t1001 (holE)
SSDB
Motif
Pfam: DNA_pol3_theta
Other DBs
NCBI-ProteinID: AAO68673
UniProt: Q8XF73
Position
complement(1090560..1090790)
AA seq 76 aa
MKTNLAQLEQAEMDKVNVDLAAAGVAFKERYNMPVVAEAVEREQPEHLRAWFRERLIAHR
LASVSLSRLPYEPKVK
NT seq 231 nt   +upstreamnt  +downstreamnt
atgaaaacgaatctggctcagcttgaacaagcggaaatggataaagtcaatgtggatctg
gcggcagctggggtggcatttaaagagcgctacaatatgccagttgtcgcggaggcggtc
gaacgtgagcagccagagcatctacgcgcctggtttcgcgagcggctgattgcccatcgt
ctggcttccgtatcactatcccgactcccttacgaacccaaagttaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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