KEGG   Salmonella enterica subsp. enterica serovar Typhi Ty2: t3461
Entry
t3461             CDS       T00121                                 
Symbol
hupA
Name
(GenBank) histone like DNA-binding protein HU-alpha
  KO
K05787  DNA-binding protein HU-alpha
Organism
stt  Salmonella enterica subsp. enterica serovar Typhi Ty2
Brite
KEGG Orthology (KO) [BR:stt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:stt03032]
    t3461 (hupA)
   03036 Chromosome and associated proteins [BR:stt03036]
    t3461 (hupA)
   03400 DNA repair and recombination proteins [BR:stt03400]
    t3461 (hupA)
DNA replication proteins [BR:stt03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    t3461 (hupA)
Chromosome and associated proteins [BR:stt03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    t3461 (hupA)
DNA repair and recombination proteins [BR:stt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      t3461 (hupA)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1 HU-CCDC81_euk_2 DUF2267
Other DBs
NCBI-ProteinID: AAO70977
UniProt: P0A1R7
Position
complement(3551212..3551484)
AA seq 90 aa
MNKTQLIDVIADKAELSKTQAKAALESTLAAITESLKEGDAVQLVGFGTFKVNHRAERTG
RNPQTGKEIKIAAANVPAFVSGKALKDAVK
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaagactcaactgattgatgtaattgcagacaaagcagaactgtccaaaacccag
gctaaagctgctctggaatccactctggctgctattactgagtctctgaaagaaggcgat
gctgtacaactggttggtttcggtaccttcaaagtgaaccaccgtgctgagcgcactggc
cgtaacccacagaccggtaaagaaatcaaaatcgccgccgctaacgtaccggcgtttgtt
tctggtaaagctctgaaagacgcagttaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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