KEGG   Salmonella enterica subsp. enterica serovar Typhi CT18: STY3054
Entry
STY3054           CDS       T00064                                 
Symbol
ygbB
Name
(RefSeq) 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
  KO
K01770  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
Organism
sty  Salmonella enterica subsp. enterica serovar Typhi CT18
Pathway
sty00900  Terpenoid backbone biosynthesis
sty01100  Metabolic pathways
sty01110  Biosynthesis of secondary metabolites
Module
sty_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:sty00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    STY3054 (ygbB)
Enzymes [BR:sty01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.12  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
     STY3054 (ygbB)
SSDB
Motif
Pfam: YgbB
Other DBs
NCBI-GeneID: 1249357
NCBI-ProteinID: NP_457318
UniProt: Q8Z472 A0A714PU38
Position
complement(2919837..2920316)
AA seq 159 aa
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKL
FPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDL
GCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
NT seq 480 nt   +upstreamnt  +downstreamnt
atgcgaattggacacggttttgacgtacacgcgtttggcggagaagggccgattattatt
ggcggcgtgcgtatcccttatgaaaaagggctattggcgcattccgatggcgatgtggcg
ttacatgcgctgaccgatgcgctgctgggcgcggcggcgcttggcgatatcggcaagctc
ttcccggataccgatccggcatttaagggagcggatagccgcgaactactgcgtgaagcc
tggcgtcgtattcaggccaagggatacaccctcggcaacgtggatgtcaccattattgcg
caggcgccgaaaatgctgccgcatattccgcaaatgcgcgtctttatcgccgaagatctc
ggctgccatatggatgatgttaacgtgaaggcgacgacgacggaaaagctcggatttacc
ggacgcggagaaggcattgcctgcgaagcggtggcgttgctgatgaaggcggcgaaatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (23)   

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