KEGG   Sulfurimonas autotrophica: Saut_0318
Entry
Saut_0318         CDS       T01316                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
sua  Sulfurimonas autotrophica
Pathway
sua03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:sua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Saut_0318
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sua03021]
    Saut_0318
   03400 DNA repair and recombination proteins [BR:sua03400]
    Saut_0318
Enzymes [BR:sua01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Saut_0318
Transcription machinery [BR:sua03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Saut_0318
DNA repair and recombination proteins [BR:sua03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Saut_0318
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1 DUF3835 RnfC_N
Other DBs
NCBI-ProteinID: ADN08367
UniProt: E0UU58
Position
290771..294916
AA seq 1381 aa
MLNTLYSGNRLRVDFSKTPQEIEVPNLLQLQQSSYDTFLMLHAKNRSQSGIEKVFQSVFP
IHDAQNRLTVEYIESEVTNPKYTVRECMERGLTYAVSLRMKTRLILWERDENTKEKLGVA
DIKEQSIFVRDIPLMTERTSFIINGVERVVVNQLHRSPGVIFKEEESSTAGNKLIYTGQI
IPDRGSWLYFEYDPKDILYMRINKRRKVPVTIMFRALGYSKQDILKLFYPIQTIKIHDNM
FSIDFNPKDYASRISYDLIDMNDKVLVSSGKRLSSKKAQKLLDDGVKEVQYPLEILLERY
LAESIIDPETGEVLFDTMTHIDETKLKKMAEIGVTEFKIANDIAEGVDSSIINAFNADAD
SLKLLKQTEEIEDENDLAAIRIYKVMRPGEPVTKEAAKIFVNQLFFDPERYDLTQVGRMK
MNHKLGMNIPEYVTVLTHEDIIESVKYVIKVKNGQGHLDDRDHLGNRRIRSIGELLGNEL
HNGLVKMQKAIRDKLSTMSGPMNELMPHDLINSKMITSTIMEFFSGGQLSQFMDQTNPLS
EVTHKRRLSALGEGGLVKERAGFEVRDVHPTHYGRICPVETPEGQNIGLINTLAMYAKVN
EHGFIEAPYKVMKDGKVTHEIVYLTATQEEGKMIAAASNKLDENGQFIEDLIAVRQDGEI
LLRDPKECEYADLSSQMVIGVAASLIPFLEHDDANRALMGSNMQRQAVPLLRANAPMVGT
GIEKLVARDAWECVKAKRAGKIEKVDGKHIYVMGEEDGEIFIDYYPLQKNLRTNQNTSFT
QKPIVKIGEMVEKGQIIADGPNMDQGELALGVNAMVAFMPWNGYNFEDAIVISERLIRQD
AFTSVHIYEKEVEARELKHGVEEITRDIPNVRDDELAHLDESGIVKIGTTVSGGMILVGK
VSPKGEVKPTPEERLLRAIFGEKAGHVVNKSLYCPPSMEGVVVDIKVFTKKGYDKDPRAL
ELEKEERDYLEREHYDRLIMIDKEEMLRVTKLLTREPLQSDIKIGDTEYKAGDTINGDDL
KEVNRFAMNAIVKSFSQEIQDEYNKTKNHFQKQKRIFRDEHEEKLTILEKDDILPNGVVK
YVKIYIATKRHLKVGDKMAGRHGNKGIVSNIVPEVDMPYMEDGRSVDVCLNPLGVPSRMN
IGQILEMHLGMAGRELGNQIQEQFEAKQKDFIDDLRAKMIEIADVAGMMHASKVIGEMDD
ETFLKYARDWSKGVKFATPIFEGTDAKEFEKLYELAKMDSDGKRVLYDGKTGEKMKERVN
VGYMYILKLHHLVDEKIHARSTGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGASAV
LKEMLTIKSDDVDGRVRAYKALTKGELVPESGIPETLFVLTKELQALALDVEIMDEVEDD
E
NT seq 4146 nt   +upstreamnt  +downstreamnt
atgttaaacactttatattccggaaaccgtcttcgtgtagacttctctaaaactcctcaa
gaaattgaagtaccaaatttactccaactgcaacaaagttcatatgacacatttttgatg
ttacatgcaaaaaacagaagccaaagcggtattgaaaaagtatttcaatcagtatttcct
attcatgatgcacaaaacaggttaactgttgagtatattgagtcagaagtaacaaatcca
aaatatacagttcgtgagtgtatggagagagggcttacatatgcagtaagtcttagaatg
aaaactcgtcttatcttatgggaaagagatgaaaatacaaaagaaaagcttggtgtagca
gatattaaggaacaaagtatatttgttcgtgatattccattaatgacagaaagaacatca
tttataatcaatggtgttgaacgtgttgttgtaaatcaacttcaccgctcaccgggtgtt
attttcaaagaagaagaatcttctacagcaggaaataaactgatctatactggtcaaatc
attccagaccgcggttcatggttgtattttgaatatgatcctaaagatattctttacatg
agaattaacaaacgccgtaaagtgcctgtaacaataatgttccgtgctttaggctattct
aaacaagatattttaaaactgttttacccaattcagacaataaaaatacatgataatatg
ttctctatagatttcaaccctaaagattatgcgtcacgtatctcttatgatttgattgat
atgaatgacaaagtactagtatcttcaggaaaaagactctcatctaaaaaagcacaaaag
cttttagatgacggtgtaaaagaagttcaatatccactagaaatacttttagaaagatat
cttgctgaatcgattattgaccctgaaaccggtgaagttctttttgatacaatgactcat
atcgatgagactaaattaaagaaaatggctgaaattggtgtcactgagtttaaaatcgca
aatgatatagcagaaggtgttgacagttctataatcaatgcattcaatgctgatgcagat
tcactcaaacttttaaagcaaacagaagaaattgaagatgaaaacgacttagctgcgatt
cgtatatataaagttatgcgtccgggtgagcctgttacaaaagaggctgcaaaaatattt
gtaaatcaacttttctttgatcctgaaagatatgatttgactcaggttggtcgtatgaaa
atgaatcataagttaggaatgaatattccggaatatgtaacagttttaacacatgaagat
attattgaatctgtgaaatatgttataaaagttaaaaacggtcaggggcacttagatgac
agagatcacttaggtaaccgtcgtattcgttctatcggtgagcttttaggaaacgagtta
cacaatggtcttgtaaaaatgcaaaaagcgattcgtgacaaactctctactatgagtgga
ccgatgaatgagcttatgccgcatgatttgattaactcaaaaatgattacgtctacaatt
atggaattcttttccggtggacagctttctcagtttatggatcaaacgaatccgctctct
gaggtaacccacaaacgtcgtctttcagcactcggtgaaggtggtcttgttaaagagaga
gccggctttgaagtgcgggatgttcaccctactcactatggtagaatatgcccggttgag
actccagagggtcaaaatatcggtcttatcaatacacttgcaatgtatgcaaaagtaaat
gagcatggtttcattgaagcaccatacaaagttatgaaagatggaaaagttacacatgaa
attgtttacctgactgcaacgcaggaagagggcaaaatgattgctgctgcttcaaataaa
cttgatgaaaatggtcagtttattgaagacttgattgctgtaagacaagatggtgaaatt
cttttaagagatccaaaagagtgtgaatatgctgacctttcttctcaaatggttatcggt
gtggcagcttctcttattccattcttggaacatgatgatgccaaccgtgcacttatggga
tcaaatatgcagcgtcaggctgtccctcttttacgtgcaaatgctccaatggttggaaca
ggtattgaaaaacttgttgcccgtgatgcatgggagtgtgtaaaagcaaaacgtgcaggt
aaaatagaaaaagttgacggaaaacacatctatgtaatgggtgaagaagatggagaaatt
tttatcgattactatccattacaaaaaaatcttcgtaccaaccaaaatacatcatttaca
caaaaaccgattgtaaaaatcggagaaatggtagaaaaaggtcaaataattgctgatggt
ccgaatatggatcagggggaacttgcactcggtgtaaatgctatggttgcctttatgcca
tggaatggatacaactttgaggatgcgattgttatctcagagcgtttaattcgccaagat
gcatttacttcagtacatatttatgaaaaagaagtcgaagcacgtgaacttaaacacggt
gtcgaagagattactcgtgacattccaaatgtgcgtgatgatgaattggctcatttagat
gaaagcggtattgttaaaatcggtacaactgtgagtggaggtatgattttagtagggaaa
gtttctccaaaaggtgaagtgaagccaactcctgaagagcgtcttttacgtgcaattttt
ggtgaaaaagccggacatgttgtcaataaatcactctactgcccaccgtcgatggagggt
gttgttgtagatattaaagtatttacgaaaaaaggctatgacaaagatcctcgtgcattg
gaacttgaaaaagaagagagagattatttagagcgtgagcattatgacagacttatcatg
attgataaagaagagatgcttcgtgttacaaaacttttaactcgtgaaccattgcaaagt
gacattaaaataggtgatactgagtataaagcaggagacacaattaatggagatgattta
aaagaagtgaatcgttttgctatgaatgcgattgttaaatctttttcacaagagatacag
gatgagtacaacaaaacgaaaaatcatttccaaaagcaaaaaagaatttttagagatgag
catgaagaaaaattaacgattttagaaaaagatgacatcttaccaaacggtgtagtgaag
tatgtaaaaatttacatcgctacaaaacgtcacctcaaagtcggtgataaaatggcaggt
cgtcacggaaataaaggtatcgtttcaaatattgttccggaagttgatatgccgtatatg
gaagacggacgtagtgttgatgtgtgtctgaatccgcttggtgtaccttctcgtatgaat
atcggtcagattttggagatgcaccttggtatggcaggacgtgagcttggaaaccagatt
caagagcagtttgaagcaaaacaaaaagattttatagatgatcttcgtgcaaaaatgatt
gaaatagcagatgtagcaggaatgatgcatgcaagcaaagtaatcggtgaaatggatgat
gagactttcttaaaatatgcaagagactggtcaaaaggtgtgaaattcgcaacacctatt
tttgaaggtacagatgcaaaagagtttgaaaaactttatgaactggcaaaaatggacagt
gacggtaaacgcgttttatatgatggaaaaacgggtgagaagatgaaagagcgtgtaaat
gtcggttacatgtatatcttgaaactgcaccacttggttgatgaaaaaattcacgcacgt
tcaacaggaccatattcacttgttacacaacaaccggtcggcggtaaagcactctttggt
ggacaaagatttggtgagatggaagtctgggctcttgaagcatatggagcatcagcagtt
ctaaaagagatgttgactatcaaatcagatgatgttgatggtcgtgtacgtgcgtataaa
gcacttacaaaaggtgagttagtaccagaatctggtattcctgaaacactatttgtatta
acaaaagagcttcaagcattggctcttgatgtagagattatggacgaggtagaagacgat
gagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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