KEGG   Streptococcus uberis: SUB1565
Entry
SUB1565           CDS       T00849                                 
Name
(GenBank) conserved hypothetical protein
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
sub  Streptococcus uberis
Pathway
sub03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sub00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SUB1565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sub03400]
    SUB1565
Enzymes [BR:sub01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     SUB1565
DNA repair and recombination proteins [BR:sub03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SUB1565
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_4 UvrD_C_2 SH3_13 Viral_helicase1 AAA_11 UvrD-helicase DEAD HHH_5 AAA_22 Herpes_Helicase AAA_16 AAA_12 nSTAND3 PIF1 TsaE AAA_14 AAA_28 AAA T2SSE SLFN-g3_helicase RsgA_GTPase AAA_5 Zeta_toxin HHH NTPase_1 AAA_18 5_3_exonuc AAA_23
Other DBs
NCBI-ProteinID: CAR43355
UniProt: B9DVL2
Position
1555192..1557615
AA seq 807 aa
MEHYFTGTIDRIIYENASNFFKILLLSIEDTDSDIDDFEIIITGTMADVFEGEDYTFWGE
LTQHPKYGQQVKLTRYQKAKPTSSGLIKYFSSDHFKGIGKKTAEKIVSLYGDNTIDKILE
DPSQLETITGFSKANREAFLATLKLNYGTEQIISSLVELGISNRLAFLIYDCYKEEALET
VKTNPYQLVEDIQGIGFKMADTLAFEIGIKSDAPERFRAALLHSLLEKSISQGDTYIEAR
DLLEYAINLLEDSRPIECQPAQVAEQLSQLIADSKIYHIGTKLFDATLYASEAGIHKHIS
RLLETPLSQPHSEESIDEEIQSIEASFNMTYDRIQKEAIKLALSSKVFILTGGPGTGKTT
VIRGILEAYSSLNKIDLEKKDLPILLAAPTGRAARRMNELTGLPSATIHRHLGLNGDNDY
QAMDDYLDCDLIIIDEFSMVDTWLANQLLSSLPSSTQVIIVGDSDQLPSVGPGQVLADLL
KVPSIPKIALQKIFRQSEDSTIVDLANQMRLGHLPRDFKEKKADRSFFEAYAQHIPTMVT
KIVTSAINSGIPKEEIQILAPMYKGQAGINHLNQLMQDLLNPLGDGQEFLFNDIHLRRGD
KILHLVNDAQLNVFNGDIGYIRDLIPAKYTESKQDEIIMDFDGTEVTYPRNEWLKITLAY
AMSIHKSQGSEFQVVILPITHQGGRLLQRNLIYTAVTRSKSKLILLGEYSAFHYAIQKEG
DKRQTYLVQRFADSSLTETLDNDSGDDHLQNAQLSPQKITNDVQYLPIKDSGPQEEEAYR
LTLENMLSIDPMIGLKEEDILIFFNKN
NT seq 2424 nt   +upstreamnt  +downstreamnt
atggagcactatttcactggaacaatcgaccgcattatctacgagaacgccagtaatttt
tttaaaatccttctcttatctattgaagatacggacagtgacattgatgattttgaaatt
attatcactggtacaatggctgatgtttttgaaggagaagattacacgttttggggcgaa
ttaactcaacaccctaaatacggccaacaagtaaaattaaccagataccaaaaagcaaaa
ccgacgtcgtctggcctaattaagtacttttccagtgaccattttaaagggattggaaaa
aagacagcagaaaaaattgtctctttatacggagacaacaccattgataaaattctagaa
gaccctagtcaattagagaccataacaggattttcgaaggccaatagagaagcctttctg
gcaacattaaagctaaattacggaacggaacaaattatttcatcccttgttgaacttggc
atttcaaatcgtcttgccttcttaatctatgattgctacaaggaagaagccttagaaact
gtcaaaaccaacccctatcaacttgtagaagacattcaaggaattggctttaaaatggct
gatacacttgcctttgaaattggaatcaaaagtgatgctcccgaacgcttccgtgcagca
ctcttacattcacttttagaaaaatccatcagtcaaggagatacttatatagaagcgcgt
gatctcctagaatatgccattaatctcttagaagattcgagaccaattgaatgtcaaccc
gcccaagtggctgaacaattaagtcaattgattgctgattcaaaaatttatcatattgga
acaaaactctttgatgccaccctttacgcatctgaagcaggcattcataagcatatttca
cgtcttttagaaaccccattatcgcagcctcattctgaggaatccattgatgaagaaatc
cagtcaatagaagcttctttcaatatgacttatgataggattcaaaaagaagccataaaa
ctagcactttccagtaaagtttttatcttaacaggaggacccggtactggaaaaacaact
gtgattagaggtattctcgaggcctattcctccttaaacaagattgatcttgaaaaaaaa
gatcttccaatcctcttagctgcgccaactggcagagcagctagacgaatgaatgagttg
actggtttacctagcgccaccattcaccgacatttgggcctaaacggggataacgattac
caagcaatggatgattatttagactgtgatttaatcattatcgatgaattttccatggtt
gatacttggcttgccaaccaactcctaagctctttaccatcaagcacacaagttatcatt
gtgggcgacagtgaccaacttccctctgtcggaccaggacaagtactagccgatttgcta
aaagttccaagcattccaaaaattgcccttcaaaagatttttaggcaatccgaagattct
accattgtcgatttagccaatcaaatgagactgggacatttgccaagggactttaaagaa
aaaaaagccgatcgctcattttttgaagcttacgcccaacatattccaacaatggtgaca
aaaatagtaacttctgctataaatagcggaattccaaaagaagaaattcaaattttggca
cccatgtacaaaggccaagccggaattaaccatttaaatcaattaatgcaagatctcctt
aacccacttggtgatggacaagagtttctctttaacgatatacatttaaggaggggagat
aagattctccacttggtcaatgatgcccaattaaatgtttttaatggcgatattggatat
attagagacttgattccagcaaaatacactgaatcaaaacaagatgaaattatcatggac
tttgatggaactgaagttacttacccaagaaatgaatggctgaaaatcacccttgcttat
gccatgagtatccataaatcacaaggaagtgaatttcaagtggttattttaccaatcacg
catcaaggggggcggctgttacaacgcaatcttatctatacagctgtcacgcgctccaag
agcaaacttatcctacttggagaatattcagcctttcattatgctatccaaaaagaagga
gataagcgtcaaacttatttggtgcaacgctttgctgatagctcactaacagaaactcta
gataatgactcaggtgacgaccaccttcaaaatgctcagctttcgcctcaaaaaattacg
aatgacgtccaatacctaccaatcaaggactcaggtcctcaagaagaagaggcctatcgc
ttgaccctcgaaaatatgttaagcattgatcctatgattggtctcaaagaagaggacatt
ctcatcttttttaataaaaattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (30)   
   Pfam (30)   
All databases (40)   

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