KEGG   Staphylococcus aureus subsp. aureus ED133: SAOV_2162c
Entry
SAOV_2162c        CDS       T01869                                 
Name
(GenBank) transcription termination factor
  KO
K03628  transcription termination factor Rho
Organism
sue  Staphylococcus aureus subsp. aureus ED133
Pathway
sue03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sue00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SAOV_2162c
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sue03021]
    SAOV_2162c
   03019 Messenger RNA biogenesis [BR:sue03019]
    SAOV_2162c
Transcription machinery [BR:sue03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     SAOV_2162c
Messenger RNA biogenesis [BR:sue03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     SAOV_2162c
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT OB_RNB Spore_III_AA ATPase_2 Mor AAA_25 AAA
Other DBs
NCBI-ProteinID: ADI98617
Position
complement(2207145..2208461)
AA seq 438 aa
MPERERTSPQYESFHELYKNYTTKELTQKAKTLKLTNYSKLNKKELVLAIMEAQMEKDGN
YYMEGILDDIQPDGYGFLRTVNYSKGEKDIYISASQIRRFEIKRGDKVTGKVRKPKDNEK
YYGLLQVDFVNDHNAEEVKKRPHFQALTPLYPDERIKLETETQNYSTRIMDLVTPIGLGQ
RGLIVAPPKAGKTSLLKEIANAISTNKPDAKLFILLVGERPEEVTDLERSVEAAEVVHST
FDEPPEHHVKVAELLLERAKRLVEIGEDVIILMDSITRLARAYNLVIPPSGRTLSGGLDP
ASLHKPKAFFGAARNIEAGGSLTILATALVDTGSRMDDMIYEEFKGTGNMELHLDRKLSE
RRIFPAIDIGRSSTRKEELLISKSELDTLWQLRNLFTDSTDFTERFIRKLKKSKNNEDFF
KQLQKSAEESTKTGRPII
NT seq 1317 nt   +upstreamnt  +downstreamnt
atgcctgaaagagaacgtacatctcctcagtatgaatcattccacgaactgtacaagaat
tatactaccaaggaactcactcaaaaagctaaaactcttaagttgacgaactatagtaaa
ttaaataaaaaagaacttgttctagctattatggaagcacaaatggaaaaagatggtaac
tattatatggaaggtatcttagatgatatacaaccagatggttatggttttttaagaaca
gtgaactattctaaaggggaaaaagatatttatatatctgctagccaaattcgtcgtttt
gaaattaaacgtggggataaagtaactgggaaagttagaaaacctaaagataacgaaaaa
tattatggcttattacaagttgactttgttaatgaccataacgcagaagaagtgaagaaa
cgtccgcatttccaagctttgacaccactttatccagatgagcgtattaaattagagaca
gaaacacaaaattattcaacgcgcatcatggatttagtaacaccgattggtttaggtcaa
cgtggtttaatagtggcgccacctaaagcaggtaaaacatcgttgttaaaagagatagcg
aatgcaatcagtacgaacaaaccagatgcaaagctatttattttgttagttggcgagcgt
cctgaagaggtaacagatttagaacgctcagtagaagctgctgaagtcgttcattcaacg
tttgacgaaccaccagaacaccatgttaaagtagctgaattattacttgaacgtgcaaag
cgtttagtagaaattggggaagatgtcattattttaatggattctataacgagattagca
cgcgcttataacttagttattccaccaagtggtcgtacattatcaggtggtttagatcct
gcctctttacacaaaccaaaagcattcttcggtgcagcgagaaatattgaagcaggtgga
agtttaacaatacttgcaactgcattagttgatacgggttcacgtatggacgatatgatt
tacgaagaatttaaaggaacaggtaacatggagttacatttagatcgtaaattgtctgaa
cgtcgtatcttccctgcaattgatattggcagaagttcaacgcgtaaagaagaattgttg
ataagtaaatctgaattagacacattatggcaattaagaaatctattcactgactcaaca
gactttactgaaagatttattcgcaaacttaaaaagtctaagaataatgaagatttcttc
aagcagctacaaaagtctgcagaagaaagtactaaaacgggtcgacctataatttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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