KEGG   Sulfuriferula sp. AH1: CAP31_13980
Entry
CAP31_13980       CDS       T04857                                 
Name
(GenBank) ribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
sulf  Sulfuriferula sp. AH1
Brite
KEGG Orthology (KO) [BR:sulf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sulf03016]
    CAP31_13980
Enzymes [BR:sulf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     CAP31_13980
Transfer RNA biogenesis [BR:sulf03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    CAP31_13980
SSDB
Motif
Pfam: RNB RNase_II_C_S1
Other DBs
NCBI-ProteinID: ARU32677
UniProt: A0A1Y0GAF6
Position
complement(2776497..2778389)
AA seq 630 aa
MYLLYEEDGQFKAGTIITDNETSLQVDSQHGKRVKVKVINVMMRFAAPAPAEFIAAAQSI
RDEADADFLWEVASQEEFGFGDLAADYFGHVPTPTESAGILMRLHESPMHFYKKGRGRYK
SAPAEALTAAKAGVERRQREAEQLAAYVAELTAFSLPADLREHVAQLLYAPDKNHLMWKA
LDAACKHTGLTPLKLLDRCGAIASSHDYHLQLFLREHFPCGIGFAEVEALSAIPDLPMAE
VSAFSIDDAATTEIDDAFSVLRLANGNWQVGVHIAAPALGIAPASRLDQIAAQRLSTVYY
PGGKITMLPDAAIADYTLSEGRTAPALSMYIEVTDGAWQVVSHATRVESVHIAANLRHEL
LEGHFNHENLTAGSGTYAHQAELTMLWHFSGALEAARGKTPDPKLPQRVDYNFKVENDRV
TITDRLRGNPIDRVVSELMIFVNAEWGKWLADTGTMALYRTQQNGKVKMSTKPAPHVGLG
VAQYTWASSPLRRYVDLINQRQVIALAQEAPPPYPPKSDTLYTVLRDFELAYDAYNEFQR
KMERYWCLRWLQQENVSRIRASVIKENLVRLEGLPFITRVPSLPELAAGSQVNLSIDEVD
LLDVELSCTFLNKSVPDNDTAPAGGDSGLE
NT seq 1893 nt   +upstreamnt  +downstreamnt
atgtatttactctacgaagaagatggccagttcaaggccggaaccataattactgataac
gagacctcgttacaagtcgacagccagcacggcaagcgtgtcaaagtgaaagtcattaac
gtgatgatgcgttttgcagcaccggccccggccgagttcatcgcagcagcccagagcata
cgggatgaggcggatgccgattttctatgggaggtcgccagtcaggaagagttcggtttt
ggcgatctggccgccgactatttcgggcatgtgccgacaccgactgaatctgcaggtatt
ctgatgcgtttgcacgaatcgcctatgcacttctacaagaagggccgggggcggtataaa
tcggctcctgccgaagcgctgactgcggccaaggccggcgttgagcgtagacagcgcgaa
gccgagcagctggcagcgtatgttgccgagctgacggcattcagcttaccggccgatctg
cgcgagcatgtagcgcaattactctatgcgcccgataaaaaccatctgatgtggaaagcg
ctggatgcggcatgcaagcataccggcttaacgccgctgaaactgctcgaccggtgcggc
gcgatcgcctccagtcatgattaccatttgcaattatttttacgcgagcattttccgtgt
ggtatcggctttgccgaagtcgaggcattgtcagccatccctgatttgccgatggcagaa
gtcagtgcgttcagcatagatgatgccgcaaccacggaaatagatgatgccttctctgtg
ctgcgcttggcgaatggcaattggcaagtgggtgtacacatagcggcgcctgcgttggga
attgcacctgcatccagactggaccagatcgccgcccagcgtttgtcgaccgtttattat
ccgggcggcaagatcacgatgctgccggatgccgccatagccgattacaccttgagcgag
gggcgtaccgctcctgccttgtcgatgtatatcgaagtgactgatggggcatggcaggtg
gttagccatgcgacgcgtgtggaaagtgtgcatatcgccgccaatctgcgccatgaactg
ctggaagggcattttaatcacgagaatttaacggcaggcagcggaacctacgcccatcaa
gccgaactgactatgctgtggcatttttccggcgcactggaagctgcgcggggcaaaacg
ccggacccaaaactgccgcagcgggtggattataacttcaaggtggaaaatgatcgtgtg
accattaccgaccggctgcgcggcaatccgatcgatcgggtggtgtcggaattaatgatc
tttgtgaacgcggaatggggtaaatggctggcggataccggtaccatggcgttgtatcgc
acgcagcagaacggcaaggtcaagatgagcaccaaaccggcgccgcatgtcggtctggga
gtggcgcagtacacttgggcgagttccccgttgcgtcgttatgtcgatttgattaatcag
cgtcaggtcatcgcgctggcgcaggaagcgccgccgccatacccgccgaaatcggacacg
ctatataccgtattgcgtgattttgaactggcatacgatgcctacaatgagttccagcga
aaaatggaacgctactggtgcttgcgctggttgcagcaggagaatgtcagccgtattcgt
gccagtgtgatcaaggaaaatctggttcgcctggagggtttgccctttattaccagagtg
ccatccttgcccgagctggccgcaggcagtcaggtgaatctgtcgatagacgaggttgac
ttgctcgatgtcgaattgagttgtactttcctcaacaagtcggtgccggataacgatacc
gcgcccgcgggtggcgattccgggttagaataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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