KEGG   Sulfitobacter sp. JL08: C1J05_20280
Entry
C1J05_20280       CDS       T05585                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
suli  Sulfitobacter sp. JL08
Brite
KEGG Orthology (KO) [BR:suli00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:suli03016]
    C1J05_20280
Enzymes [BR:suli01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     C1J05_20280
Transfer RNA biogenesis [BR:suli03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    C1J05_20280
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2 RNase_T
Other DBs
NCBI-ProteinID: AXI56531
UniProt: A0A345RG44
Position
4141454..4142068
AA seq 204 aa
MTNHLYQNDLPDGLDMGPVVAIDCETMGLNPHRDRLCVVQLSSGDGNAHIVQIELGQTTA
PNLCALLENPDVLKLFHFGRFDIAAMYNAFAVITAPVYCTKIASRLVRTYTDRHGLKNLT
QELLGVDLSKQQQSSDWGARDLSNAQIEYAASDVLYLHQLRDALDTMLVREGRADIAKAC
FDFLPMRAKLDLAGWPETDIFAHS
NT seq 615 nt   +upstreamnt  +downstreamnt
atgacaaatcatctttatcaaaacgatcttcccgacgggctggatatggggccggttgtg
gctatcgattgtgaaacaatggggttgaatccccatcgtgatcgcctgtgtgttgttcag
cttagcagcggcgacggcaacgcgcatatcgttcagatcgaacttggtcagacgacggca
cccaacctgtgtgcattgttggaaaaccccgatgtgctgaagctgttccatttcggtcga
tttgacatcgcggccatgtacaacgcattcgcggtaataaccgcgccggtttactgcacg
aaaatcgcaagccgactggtgcgcacctataccgaccggcacggattgaaaaacctgaca
caggaattacttggggttgacctgtccaaacagcagcaatccagcgattggggtgcacgt
gaccttagcaatgcccaaattgaatatgctgcgtcggatgttctgtacctgcatcagctg
cgggatgctttggatacgatgcttgtccgtgaagggcgtgccgacatcgccaaggcgtgc
tttgactttttgccaatgcgggcaaagctggatttggcaggctggcccgaaaccgatatt
tttgcacattcctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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