KEGG   Candidatus Sulfuricurvum sp. RIFRC-1: B649_04860
Entry
B649_04860        CDS       T02537                                 
Name
(GenBank) hypothetical protein
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
sulr  Candidatus Sulfuricurvum sp. RIFRC-1
Pathway
sulr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sulr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B649_04860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sulr03019]
    B649_04860
Enzymes [BR:sulr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     B649_04860
Messenger RNA biogenesis [BR:sulr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     B649_04860
SSDB
Motif
Pfam: DEAD Helicase_C ResIII P-loop_SecA
Other DBs
NCBI-ProteinID: AFV97286
UniProt: K7SLL9
Position
954307..955683
AA seq 458 aa
MSFTTLGLNAHLLETLIEKGYTEPTPIQTQVIPLVLRGRDVLGAAQTGTGKTAAFALPII
QKLLTVQGKQSSARALVIVPTRELASQVCAAIESYAQGLELTCIALYGGANMARQAKELG
EGVDIIVATPGRLIELNKQGHVPLSRIEYLVFDEADTIFDMGFIREVGQIIDLLPLNRQN
MLFSATMTPAVKQLSEKILKKALLVEIDNLKAADMTLRQVVHPVEKERKKELLSFLIGSN
NYPQVLVFTRTKAEADEVSADLTASGLKNVVIHGDKKHGARDRALSEFREGSARILVATD
IAARGLDIEGLDVVINYDIPHVSTDYLHRIGRTGRAGNEGLAITLLSSAEHISWSKIITM
LGKNVETILVAGFEPPADNALVKTRGKSLSKEGEKKEKTAGAFGNKRKKAPVQPKFVGKR
GPRLARDELVGKSDSSARNSAFGNTKKPSPKKSGGRGR
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgtcatttacgactttagggcttaatgcccaccttctcgaaaccctaatcgagaaagga
tacactgagccgacaccgattcaaactcaggtgattcctctcgtactgcggggacgagat
gttctcggagcggcacaaaccggaacagggaaaacagccgcattcgccctcccgatcatc
caaaaattactcacagtccaagggaaacaatccagtgccagagcattggtcatcgtcccg
acacgtgagctcgcatcccaagtgtgcgcagcgatcgaatcgtatgcacaggggcttgaa
ttaacgtgtatcgctctctatggcggagccaatatggcacgtcaggcgaaagagctggga
gagggggttgatatcatcgttgctactcccggacgcttgatcgagctgaataaacaaggg
cacgttccgctctctcgaatcgagtatttggtgtttgatgaagccgatacgattttcgat
atgggctttatccgtgaggtagggcagattatcgatcttctcccgctcaatcgccaaaac
atgcttttttcggcaacgatgacccctgcggtgaaacagctgagtgaaaaaatcctcaaa
aaagcgctcctcgtcgagatcgataacctcaaagccgccgatatgacgcttcgtcaagtg
gttcatccggttgaaaaagagcgtaaaaaagagcttctttcattcctgataggctcgaac
aactatccgcaggttctcgtctttacccgtacgaaagccgaagcagacgaagtgagtgct
gatctaaccgccagtggtctcaaaaatgttgtgattcacggtgacaaaaaacacggtgcc
agagatcgtgcactcagtgaatttcgtgaaggatctgcccgtatcctcgtcgcaaccgat
attgccgcacgcggtttggatatcgaggggctagacgtcgttatcaactacgacattcct
cacgtcagtaccgactatctccaccgtatcgggcgtacgggacgcgcgggaaatgagggg
ctggcgatcacgctcctctcctcagcagagcacatttcatggtcaaaaatcatcaccatg
ctcggcaaaaatgtcgagactatcttggttgctggatttgaaccgcctgcggataacgca
ttggtaaaaacacggggtaaaagtctctccaaagagggagagaaaaaagaaaaaacggcg
ggagcattcgggaataaacgtaaaaaagctcccgttcagcctaaattcgtcggcaaacgg
ggaccacgtctcgcacgagatgaactcgtcggtaaaagcgattcttcagccagaaacagt
gccttcggtaatacgaaaaagccttcaccgaaaaaatcgggcggacgggggagataa

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