KEGG   Sulfurovum sp. NBC37-1: SUN_1927
Entry
SUN_1927          CDS       T00572                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
sun  Sulfurovum sp. NBC37-1
Pathway
sun03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sun00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SUN_1927 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sun03021]
    SUN_1927 (rho)
   03019 Messenger RNA biogenesis [BR:sun03019]
    SUN_1927 (rho)
Transcription machinery [BR:sun03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     SUN_1927 (rho)
Messenger RNA biogenesis [BR:sun03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     SUN_1927 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N Spore_III_AA OB_RNB AAA_25 Mor AAA_22 AAA
Other DBs
NCBI-ProteinID: BAF72874
UniProt: A6QBL5
Position
complement(1991280..1992605)
AA seq 441 aa
MSDNNKKPASGNHAGRKNRTHVPVQGYKIEDLQQKPLDELVTIAKEVKVENPNEYQRRDL
IFEILKSQVNQGGFILYTGILEVMNDGYGFLRSIDGNFANSSNDTYVSATQVKRFALRNG
DIVTGQVRPPKDQEKYYALLKIEAINYVAPEKSKQRPLFDNLTPLYANEKLKLEYNPMRM
TGRVLDLFTPIGKGQRALVVAPPRTGKTELLKELAHGITHNNPDASLMVLLVDERPEEVT
DMQRSVKGEVYASTFDLPAQNHVRTAEMVIEKAKRRVEMGKDVIILLDSITRLARAYNTV
TPSSGKVLSGGVDANALHKPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKG
TGNSEVVLSRHVSERRIYPAIDVTKSGTRKEELLTDPETLQKVWALRNAMQNMEEVEGLK
FLFSKMMKTKSNEEFLSMMNE
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgagcgataacaacaaaaaacctgccagtggcaaccatgccggtagaaagaacagaaca
cacgtccccgtacagggctacaagatcgaagaccttcagcaaaaacctttggatgaactc
gtcaccattgccaaagaggtcaaggtagagaaccccaacgaataccagagacgcgacctg
atattcgagatcctgaaatcacaggtgaaccagggaggattcatcctctatacgggtatc
ctcgaagtgatgaatgacggatacggtttcctccgttccatcgacgggaacttcgcaaac
tcaagcaacgatacttacgtctctgcgacacaggtgaagcgttttgccctgagaaacggt
gatattgtgaccggtcaggtacgtcctccaaaagatcaggagaagtactatgcgctgctc
aagatcgaagcgatcaactatgtggcgcctgaaaaatccaagcagagaccgctttttgac
aacctgacaccgctctatgccaatgaaaaacttaaactcgaatacaatcctatgcgaatg
acaggccgcgtgcttgacctctttactcctataggaaagggacagagagccctggtcgtt
gcaccgccgagaacaggtaagacggaactgctcaaagagttggcacacgggatcacgcat
aacaacccggatgcttcattgatggtactgcttgtagacgagagacccgaagaagttaca
gatatgcaacgctcggttaagggtgaagtctatgcctccacgttcgaccttcccgcacag
aaccatgtcaggaccgctgagatggtcatcgagaaagccaaaagacgcgtggaaatgggg
aaagatgtcatcatccttttggattcgatcaccagattggcgcgtgcctacaacacggta
acgcccagttcggggaaagtgctctccggtggtgtcgatgcgaatgcgcttcataaaccc
aaaaggttcttcggtgcagcaaggaatatcgaggagggcggctccctgaccatcatcgcc
actgcacttatagatacgggtagccgtatggatgaagtgatctttgaagagttcaaaggt
acgggtaactccgaagtggtactcagccgccacgtttcagaaagacgtatctaccctgcg
atcgacgtgacgaagtccggaaccagaaaagaagagcttctcacagaccctgaaacactc
cagaaggtctgggcgctcagaaatgcgatgcagaacatggaagaggtggaaggactcaag
ttcctcttctccaaaatgatgaagacaaagagcaacgaagaatttctttcaatgatgaac
gagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system