KEGG   Streptococcus suis SS12 (serotype 1/2): SSU12_0097
Entry
SSU12_0097        CDS       T02025                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
suo  Streptococcus suis SS12 (serotype 1/2)
Pathway
suo03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:suo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SSU12_0097
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:suo03021]
    SSU12_0097
   03400 DNA repair and recombination proteins [BR:suo03400]
    SSU12_0097
Enzymes [BR:suo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SSU12_0097
Transcription machinery [BR:suo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SSU12_0097
DNA repair and recombination proteins [BR:suo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SSU12_0097
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L Mg_chelatase_C
Other DBs
NCBI-ProteinID: AER14298
Position
85875..86813
AA seq 312 aa
MIEFEKPTITKIDENKDYGRFVIEPLERGYGTTLGNSLRRVLLASLPGAAVTSIKIDGVL
HEFDTVPGVREDVMQIILNIKGIAVKSYVEDEKKIELDVVGPAEVTAGDILTDSDIEIVN
PDHYLFTIADGATFKAVLTVNSGRGYVPAEDNKKDDAPVGTLAVDSIYTPVKKVNYQVEP
ARVGSNDGFDKLTLEINTNGTIIPEDALGLSARILMEHLGLFTDLTEVAKSAEVMKEAEV
ASDDRMLDRTIEELDLSVRSYNCLKRAGINTVFDLTEKTEPEMMKVRNLGRKSLEEVKVK
LADLGLGLKKDK
NT seq 939 nt   +upstreamnt  +downstreamnt
atgattgagtttgaaaaaccaacaataacaaaaattgatgaaaataaagattacggcaga
tttgtaatcgaaccattagaacgtggttacggtacaactcttggtaactctcttcgtcgt
gtacttcttgcctcacttccaggtgctgcagtaacatcgattaaaattgatggtgtactc
cacgaattcgacacagttccaggtgttcgtgaagatgttatgcaaattattcttaacatc
aaaggcattgctgtaaaatcttatgtcgaagacgaaaagaaaattgaacttgatgtagta
ggtccagctgaagtaacagcaggagacattcttacagatagtgacattgaaattgtaaac
cctgaccattatctctttaccattgctgatggtgccacttttaaagctgttttgactgtc
aattcaggtcgtggttatgtaccagctgaggataataagaaagatgatgcaccagtggga
acacttgctgtagattctatctatacgccagtgaagaaagtcaattatcaagttgaacca
gctcgtgttggtagcaacgatggttttgacaaattaacacttgaaatcaacacaaatggc
accattattccagaagatgctttaggtctttctgcacgtattttgatggagcacttaggt
ctcttcactgacttgactgaagttgcaaaatctgcagaagtgatgaaagaagctgaagtg
gcttcagatgatcgtatgcttgatcgtacgattgaagaattggatctatctgttcgctca
tataactgtctgaaacgtgcaggcattaacactgtattcgacttgacagagaaaactgag
ccagaaatgatgaaagtgcgcaatcttggtcgcaagagtcttgaagaagttaaagttaaa
ttggctgatcttggtctaggattgaaaaaagataaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system