KEGG   Candidatus Solibacter usitatus: Acid_0315
Entry
Acid_0315         CDS       T00412                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
sus  Candidatus Solibacter usitatus
Brite
KEGG Orthology (KO) [BR:sus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sus03016]
    Acid_0315
Enzymes [BR:sus01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     Acid_0315
Transfer RNA biogenesis [BR:sus03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    Acid_0315
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS
Other DBs
NCBI-ProteinID: ABJ81327
UniProt: Q02C89
Position
complement(412198..412761)
AA seq 187 aa
MRLFTGLDLPVEVVGNLEELLRRLKPTAQIHWSPPANLHVTTKFIGEWPEARLGELTAAL
AGVPPRRAIAVNIRRVGFFPNPHSPRIFWCGIEAPGLDLLAADTDAATTALGIEPEKRPY
SPHLTLARIKVQANLEQPNLQPLRKTIAALESLEFGSFEARSFFLYRSTLKPTGSVYTKL
AEFPLIT
NT seq 564 nt   +upstreamnt  +downstreamnt
atgagattgttcacgggactggacctgccggtcgaggtagtggggaatctggaggaactg
ctgcggcggttgaagccaaccgcgcagattcattggagcccgcccgcgaatttgcacgtg
accaccaagttcattggggaatggccggaggctcgcctgggcgagttgaccgccgcgctc
gccggagtgccgccgcgccgggcaatcgccgtaaatatccggcgggtaggattttttccc
aaccctcattctccgcgcatcttctggtgcggaatcgaagcgccgggcttggatctcctg
gcggccgataccgatgccgctacgactgcgttggggatcgaacccgagaagcggccgtat
tcccctcatctcacgcttgcacgtattaaagtgcaggccaacctggagcagccaaacctg
cagccactgcggaagacgatcgcggcgctggaatcgctggaattcgggagctttgaggcg
cgcagcttctttctctaccggagcaccttgaagccaaccggttccgtgtacactaaactt
gcggagttcccgctgatcacataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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