KEGG   Candidatus Solibacter usitatus: Acid_1906
Entry
Acid_1906         CDS       T00412                                 
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, subunit A
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
sus  Candidatus Solibacter usitatus
Brite
KEGG Orthology (KO) [BR:sus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sus03400]
    Acid_1906
Enzymes [BR:sus01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Acid_1906
DNA repair and recombination proteins [BR:sus03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     Acid_1906
SSDB
Motif
Pfam: UvrD-helicase UvrD_C PDDEXK_1 AAA_19 UvrD_C_2 Cas_Cas4 AAA_30 AAA_22 AAA_11 AAA_16
Other DBs
NCBI-ProteinID: ABJ82896
UniProt: Q027B7
Position
2365619..2368756
AA seq 1045 aa
MSAIPFTPDQLDAVDVEKRHLNACVVAGPGSGKTTVLVEYFRRLVEADVDPLRILAITFT
EKAAGNMRKKLGQAFQDQPQIRARLERAWVSTVHGFCARLLRENAVFAGVDPEFRVLDAT
ESWRMQQEAMRTAIDSLFADHLEGMRGLIRGLSSFEFEQAVLSSYDTMRGAGTPVDELTH
FPVPPGVTVDEINDTLNAIRRESLSGWNHQQKEHLETALEGAERIVGAESPIEALRAIER
FSCNLTKCKRGTNTTNLLKRMREQIEGAEYALITALYAPQRELLIEILRRFDRLYRDRKR
QGAALDFSDLEEFTVRLLEEHHETRARLQRQFDHILMDEFQDTNGQQAKLIELIRPPDRF
YAVGDINQSIFGFRHAEPQGFARYRDEIATGDRHLVQLVDNFRSRAEILSAVETLTAGAK
GIEDRALVAGRRFDDAPEHSVEVIAAPETAIEAQWVARRIMELSGPEPQFKDFAVLVRNT
EVIPEFTDAFDAAGIPYLVNRGRGFYASREVNDLTHLLRAIANPRDEISLAVVLRSPLVN
ASVEALLRLKMNGENLGAALQRSEDALLQRFGARLHEWRGRREYVTFDRLLLEAIDDCGY
PASGNVDKFLAQARDAASRMSLDEFVMELAQVREENPREPDAPPEDSANAVKIMTVHSAK
GLEFPVVFVAAIHKGVDTGVPAVAFSRHYGLGARWRNPASGQDKDDLFQHALRREWKQRE
EEESNRLFYVAMTRAEQRLILSFTAAARKPQNWDKLVMERLRIEPGTPGDAVKIFEAPDG
KQWKARILIAQAAPELLTRERTPNEEITVQFAVPPVVEEQHDSNATVTALALFAGCPRKY
YLNRYLGFEGRAARRSEGAALDAGEFGTQVHALLAGTAVASPDPEAVRLAEVFRQSPLGR
RAENAVRIEREFDFLLAIADQVIVGQVDLWFEENGELLVVDYKTDTVSASEASHRARDYG
LQLRLYALAIERMTGRAPDRGFVHFLRPNVAIEVDLTPSLIESPEQIVRDFQDAQSKLSF
PLVEGDHCKRCAYYRDLCPAGGKTD
NT seq 3138 nt   +upstreamnt  +downstreamnt
atgagcgcgattccattcacacccgaccagctggatgccgtggatgtggagaagcggcac
ctgaacgcgtgcgtggtggcagggccgggctccggcaagacaacagtgctggtggagtat
tttcgccggctggtggaggcggatgtcgatccattgcggatcctggcgatcacgttcacc
gagaaggccgcgggcaacatgcgcaagaaactggggcaggcctttcaggaccaaccccag
atccgcgcacggctggagcgggcctgggtatccacggtgcatggcttctgcgcgcggctg
ctgcgggagaacgccgtttttgccggagtggacccggagtttcgcgtgctcgacgccacc
gagagctggcggatgcagcaggaagcgatgcgcaccgcgatcgattccctcttcgcggac
cacctggagggcatgcgcgggctgattcgcggactcagctccttcgagttcgaacaggcc
gtgctctcttcttacgacaccatgcgcggggccggaacaccagtggacgagctcactcac
ttcccggtgccgcccggcgtcacggtggacgagatcaacgacaccctgaatgccatccgg
cgcgagagtttgagcgggtggaaccatcagcagaaggagcatctggaaacggcgctggag
ggcgcggagcggatcgtcggcgcggagagcccgatcgaggccttgcgcgcgatcgagcga
ttttcctgcaacctgacgaagtgtaagcgcggtacgaataccacgaacctgctgaagcgg
atgcgggaacagatcgaaggagcggagtacgcgctgatcacggcgctctatgcgccgcag
cgggaactgctgatcgagattctgcgccgcttcgaccggctgtaccgcgatcgaaagcgg
cagggcgcggcgctggatttttccgatctggaagagtttacggtacggctgctggaagag
caccacgagacacgcgcgcggctgcagcggcagttcgaccacatcctgatggatgaattc
caggacaccaacggacagcaggcgaagctgatcgagctgatccggccgccggaccggttc
tacgcggtgggcgacatcaaccaatcgatcttcggcttccggcacgcggagccgcagggg
tttgcgcgatatcgcgatgagatcgccacgggcgatcgccacctggtgcaactggtggac
aacttccgcagccgcgcggagattctgagcgctgtggagacgctgacggcgggcgccaag
ggtatcgaagatcgcgcgctcgtggccgggcgcaggttcgacgatgcgccggagcattcg
gtggaagtgatcgccgcgccggagactgcgattgaagcgcagtgggtagcgcgccgcatt
atggagctgtccggaccggagccgcagttcaaggatttcgcggtgctggtacggaatacg
gaagtcattccggagttcaccgatgccttcgatgccgccggaattccttacctggtgaat
cgggggcgcggcttctacgccagccgcgaggtgaatgacctgactcacctgctgcgggcg
atcgccaatccgcgcgatgagatctcgctcgcggtggtgctgcgctcgccgctggtgaat
gcctccgtcgaagcgctgctgcggctgaagatgaacggcgagaatctaggggccgccctg
cagcgcagtgaggatgcgctgctgcagcggttcggcgcgcggctgcacgagtggcggggc
cgtcgcgagtacgtaacgttcgaccggctgctgctcgaggcgatcgacgattgcggctac
ccggcttccgggaacgtggacaaattcctggcgcaggcgcgcgacgctgccagccgcatg
tcgctggacgaatttgtgatggagctggcccaggtgcgggaagagaatccgcgtgagccg
gatgcgccgccggaagactcggccaacgcggtgaagatcatgacggtgcactcggccaag
gggctggaattcccggtggtgtttgtggccgcgattcacaagggcgtggacaccggcgtg
ccagccgtcgcgttctcgcgccattacgggttgggcgcgcgctggcgcaatccggcaagc
ggccaggataaggacgacctcttccagcacgcactgcgccgggagtggaagcagcgcgag
gaagaggaaagcaatcgtcttttctatgtggccatgacgcgcgcggaacagcggctgatc
ctcagcttcacggccgcggcgcgcaagccgcagaactgggacaagctcgtgatggagcgc
ctgaggattgagcccgggacgccgggcgatgcggtcaagatcttcgaggcgccggatggc
aagcagtggaaggcgcggattctgatcgcccaggccgcacccgaattgctcactcgcgaa
cgcaccccgaacgaagaaatcaccgtgcaattcgcggtgccgccggtggtggaggagcag
cacgattcgaacgcgaccgtgaccgcgctcgcgctgttcgccgggtgtccgcgcaagtat
tacttgaaccgctacctgggattcgaagggcgtgcggcgaggcgctccgaaggcgcggca
ctcgacgccggggagttcggcacgcaggtccacgcgcttttggcgggcacggcggtggcc
tcgcccgatccggaggcggtgcggctagccgaggtcttccggcagagtccgctgggaagg
cgcgccgagaatgccgtgcgaatcgaacgggaattcgattttctgctggcgattgcggat
caggtgatcgtggggcaggtggatctctggttcgaagagaacggcgaactgctggtggtg
gactacaagaccgatacggttagtgcctccgaagcttcgcatcgcgcgcgcgactacggg
ctgcagcttcggttgtacgcgctggcaatcgaacgtatgacggggcgcgctccggatcgc
gggttcgtccacttcctgcggcccaacgtcgcgatcgaggtggatctgactccgtcgcta
atagaaagtcccgaacagattgttcgggactttcaagatgcgcaatcgaaactttcgttt
ccgttagtggagggcgaccactgcaagcggtgcgcctactaccgggacttgtgtccggcc
ggcggaaaaaccgattaa

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