KEGG   Sulfurifustis variabilis: SVA_1643
Entry
SVA_1643          CDS       T05321                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
sva  Sulfurifustis variabilis
Pathway
sva03030  DNA replication
sva03430  Mismatch repair
sva03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sva00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SVA_1643
   03430 Mismatch repair
    SVA_1643
   03440 Homologous recombination
    SVA_1643
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sva03032]
    SVA_1643
   03400 DNA repair and recombination proteins [BR:sva03400]
    SVA_1643
Enzymes [BR:sva01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SVA_1643
DNA replication proteins [BR:sva03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SVA_1643
DNA repair and recombination proteins [BR:sva03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SVA_1643
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DNA_pol_IIIA_C tRNA_anti_2 HROB HHH_3 Stn1
Other DBs
NCBI-ProteinID: BAU48203
UniProt: A0A1B4V3U2
Position
1672289..1675744
AA seq 1151 aa
MTAPFVHLRVHSEYSLTDGIVRIPDLVKATAEAGMPAVALTDLGNVFAGVKFYQAAVAAG
VKPIIGADLWVANSGDAHKPLRLTLLCQNREGYQNLSRLLTRAYLEGQHTGRPCIAREWL
EGLSGGLIALSGGHEGDIGAALLAANGVAARVLAADYVAWFPGRFYLELQRTGQPRQEEY
NHLAVAFAGETGLPVVATNPVVFLQRDEFQAHEIRVCIQEGRILADSRRPRRYTTQQYFR
SAAEMAELFADVPEACANTLEIARRCNFRLEFGRYYLPAFPVPEGMTIDELLIREARVGL
DRRLSKLPDAERTVKEPAYRDRLEMEIEVIAKMGFSGYFLIVADFIRWAKENDVPVGPGR
GSGAGSLVAYSLGITELDPIKYELLFERFLNPERISMPDFDVDFCMERRDRVIEYVQSRY
GADHVSQIITHGTMAARAVVRDVGRVLDHSYGYCDKIAKLIPAAPGQEITLEDALRQEPL
LKERYDREEDVRALIDSARALEGLARSAGKHAAGVVIAPGPLTDFMPLYCEAGNPLTVTQ
FDMIDIEALGLVKFDFLGLRNLTIIDHALKIINAERATRGEPPIVIEDLPLDDATTYSLI
KSARTTALFQLESRGMKELITRLKPDKFEEIVALVALFRPGPLQSGMVDDYINRKHGRTA
VKYPHPSLEAILKPTYGVILYQEQVMQIAQVLSGYTLGGADLLRRAMGKKKPEEMAKQRD
VFVKGAEGRGVNAKLAADIFDLIEKFAGYGFNRSHSAAYALIAYQTAWLKAHYPAAFMAA
VLSSDMDKTDKVVTMIAECRDMRLNVIPPDINRCQYAFVPVDDKTVLYGLGAIKGLGQSA
IEGILQTREEGGPFRDLFDLCRRIDARRVNRRVLESLIKAGALDALGTHRAALMASLTKA
VADADQHSRNVATGQSDLFGAGPAPSEALAYEAVPEWSEDQRLEGEKETLGLYLTGHPIN
RYADELKRITSATIAELKPTQDRAVVVAGLVVGMRIMQTRRGDRMAFITLDDRTGRLELA
VFSELFERNRDLLVKDTLLIVEGHVAVDEYTGGFKMSAEKLYNIEQARAAFGSRVVIELD
AGIAGNGFVDELREILAPASQGPCPVHLRYRSDAAEAEIVLGEEWRIRPSSAVLERLARL
AGERNVRLVYR
NT seq 3456 nt   +upstreamnt  +downstreamnt
gtgaccgcgcccttcgtccatctccgggtacattccgaatattcgctgaccgacggcatt
gtgcgcatccccgacctcgtgaaggcgacggcagaggcgggcatgccggcggtagcgctc
accgatctggggaacgtcttcgccggggtcaagttttaccaggcggcggttgcggccggc
gtcaagccgatcataggggccgacctctgggtggcgaactccggcgatgcccacaagccg
ctgcgcctcacgctgctttgccagaaccgggaaggctatcagaacctgtcgcggctgctc
acgcgcgcctatctcgaaggtcagcacaccgggcggccgtgcatcgcgcgtgaatggctg
gaaggtctttccggcggcctgatcgccctgtcgggcggacacgagggcgacatcggggca
gcgctcctcgccgctaacggcgttgccgcgcgtgtccttgccgccgactacgtggcgtgg
tttcccggccggttctacctcgagctgcagcgcaccggacaaccgcgccaggaagagtac
aaccatctcgccgtcgccttcgccggcgagacgggcctgccggtcgtcgcgaccaatccg
gtggtgttcctgcagcgcgatgaattccaggcgcacgagatccgcgtgtgcatccaggag
gggcgcattcttgcggacagccgccgcccgcggcgctacacgacgcagcagtactttcgc
agcgcggccgagatggcggagcttttcgccgacgtgcccgaggcctgcgccaacacgctc
gagatcgcgcggcgctgcaacttcaggctcgagttcgggcgctactaccttcccgcgttc
cccgtccccgagggaatgaccatcgacgagctcctgatccgcgaggcccgggtagggctc
gaccgaagactgtcgaagctgccggacgccgagcgaaccgtcaaggagccggcctaccgc
gaccggctggagatggagatcgaggtcatcgcgaaaatggggttctccggctacttcctg
atcgtcgccgacttcatccgctgggccaaggagaacgacgtgccggtcgggcccggtcgc
ggctcgggggcgggctcgctcgtcgcgtacagcctcgggatcaccgagctcgatccgatc
aagtacgagctgctcttcgagcgcttcctgaaccccgagcgtatctccatgccggacttc
gacgtggacttctgcatggagcggcgggaccgggtcatcgagtacgtgcagtcgcgctac
ggcgccgaccacgtttcgcagatcatcacccacggcacgatggcggcgcgcgcggtggtg
cgtgacgtcgggcgcgtgctcgatcattcctacggctactgcgacaagatcgcgaagctg
atcccggccgcgcccgggcaggaaatcacgctcgaggacgcgctcaggcaggagccgctg
ctcaaggagcgctacgacagggaggaggacgtgcgcgcgctcatcgacagtgcccgcgcg
ctcgagggtctcgcgcgcagcgccggcaagcacgcggccggcgtcgtcatcgcgcccggc
ccgctcaccgacttcatgccgctctactgcgaagccgggaacccgctcacggtcacgcag
ttcgacatgatcgacatcgaggcgctcggcctcgtgaagttcgacttcctgggccttcgc
aacctcacgatcatcgaccacgcgctcaagatcatcaacgcggagcgcgcgacgcgcggg
gagccgccgatcgtgatcgaggacctgccgctcgacgacgcgacgacctactccctcatc
aagtctgcgcgcacgacggcgctgttccagctcgagtcgcgcggcatgaaggagctgatc
acgcgcctgaagcccgacaagttcgaggagatcgtcgcgctggtcgcgctgttccgcccg
ggcccgctccagtcgggcatggtcgacgactacatcaaccgcaagcacgggcgcacggcc
gtcaagtatccgcatcccagtctcgaggcgatcctcaagcccacctacggcgtcatcctg
taccaggaacaggtgatgcagatcgcgcaggtactctcgggctacacgctcggcggtgcc
gacctgctgcgccgcgccatgggcaagaagaagcccgaggagatggcgaagcagcgcgac
gtgttcgtgaagggcgcggagggtcggggcgtgaacgccaagctcgcggccgacatcttc
gacctgatcgagaagttcgcgggatacggcttcaaccgatcgcattccgcggcgtacgcg
ctcatcgcgtaccagacggcgtggctcaaggcgcattacccggcggcgttcatggcggcg
gtgctctcgtccgacatggacaagaccgacaaggtcgtcacgatgatcgccgagtgccgg
gacatgcggctgaacgtgatcccgcccgacatcaaccggtgccagtacgcgttcgtgccc
gtcgacgacaagaccgttctctacgggctcggggcgatcaaggggctgggccaatcggcg
atcgaaggcatactccagacgcgcgaagagggcggacccttccgtgacctgttcgacctt
tgccggcgtatcgacgcccggcgcgtcaaccggcgcgtgctcgagtcgctcatcaaggcc
ggcgcgctggacgcgctcgggacccaccgggcggcgctcatggcctcgctcaccaaggcg
gtcgcggacgcggatcagcacagtcggaacgtcgccacggggcagtccgatctcttcggg
gccggtccggcgccgagcgaggcgctcgcctacgaggcggtgccggagtggagcgaggac
cagcgcctggagggcgagaaggagacgttgggcctctacctgaccgggcacccgatcaac
cggtatgccgacgagctcaagcgcatcaccagcgccacgatcgccgagctcaagcccacg
caggaccgggcggtcgtcgtcgccggcctcgtcgtcggaatgcgcatcatgcagacccga
cggggcgaccgtatggcgttcatcaccctggacgaccggaccggccggctcgagctcgcc
gtcttctcggagcttttcgagcgaaaccgcgatctcctggtgaaggacaccctgctgatc
gtcgaggggcacgtggccgtcgacgagtataccggcggtttcaaaatgtccgcggagaag
ctctataatatcgagcaggcgcgcgcggccttcggttcccgcgtggtcatcgaactggac
gcgggaatcgcggggaacggctttgtcgacgagctccgggagattctcgcacccgcaagc
caggggccatgcccggtacaccttcggtaccgaagcgacgccgcggaggccgaaatcgtg
ctgggcgaggagtggaggatacgccccagcagcgcggtactcgagcgactggcgcgcctc
gccggcgagcgcaacgtccgtctggtctaccgctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (46)   
   KEGG ORTHOLOGY (1)   
   RefGene (43)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (66)   

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