KEGG   Stella vacuolata: STVA_05870
Entry
STVA_05870        CDS       T06335                                 
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease 7 small subunit
  KO
K03602  exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
Organism
svc  Stella vacuolata
Pathway
svc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:svc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    STVA_05870 (xseB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:svc03400]
    STVA_05870 (xseB)
Enzymes [BR:svc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     STVA_05870 (xseB)
DNA repair and recombination proteins [BR:svc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     STVA_05870 (xseB)
SSDB
Motif
Pfam: Exonuc_VII_S DUF6212
Other DBs
NCBI-ProteinID: BBK40567
Position
complement(605196..605465)
AA seq 89 aa
MAKEPNVKDAAPEADVARLSFEEALAELEKIVRQLEGGQGGLEQAIDAYQRGVLLKRHCE
RKLAEAQAKIEQIAIGPDGSVTAEPMKLA
NT seq 270 nt   +upstreamnt  +downstreamnt
atggccaaggaaccgaatgtcaaagacgccgcccccgaggcggatgtcgcccgcctcagc
ttcgaggaagcgctggcggaactggagaagatcgtccggcagctcgagggcggccagggc
ggcctggagcaggcgatcgacgcctaccagcgcggcgtgctgctgaagcgccattgcgag
cgcaagctggccgaggcgcaggccaagatcgagcagatcgccatcggccccgacgggtcg
gtgaccgcggagccgatgaagcttgcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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