KEGG   Stella vacuolata: STVA_06210
Entry
STVA_06210        CDS       T06335                                 
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
svc  Stella vacuolata
Brite
KEGG Orthology (KO) [BR:svc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:svc03016]
    STVA_06210
Enzymes [BR:svc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     STVA_06210
Transfer RNA biogenesis [BR:svc03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    STVA_06210
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2
Other DBs
NCBI-ProteinID: BBK40601
Position
644192..644788
AA seq 198 aa
MGLSGPNPSTANLATVLPMIRLFVAIPLPETLRRSLSLLGGGIPGANWVAADNLHLTLRF
IGEVDEGTARDVDDMLSGLDVPAVDVRVAGMGQFGEGDRARLLYAAVERTPELVRLQERV
EAAVVRGGCPHERRKFAPHITLARLKGAAMPRVQGFIAAHALLRWPPFTADRVVLYSSHL
GREGPIYRALADYPLRVW
NT seq 597 nt   +upstreamnt  +downstreamnt
ttggggctgtccggccccaacccctcgaccgcaaatcttgcgacggttctcccgatgatc
cgcctcttcgtggccatccccctgcccgagaccctgcgccgttccctctccctgctgggc
ggcggcatccccggcgccaactgggtcgcggccgacaacctgcacctgaccctgcgcttc
atcggcgaagtcgacgagggcaccgcgcgcgacgtggatgacatgctgtccggcctcgat
gtgccggcggtcgacgtccgggtcgccggcatgggccagttcggcgagggcgaccgggcg
cggctcctctatgcggcggtcgagcggacgccggagctggtccggctccaggaacgggtg
gaagcggcggtggtgcgcggcggctgcccgcacgagcggcgcaagttcgccccccatatc
acgctcgcccggctcaagggggcggcgatgccgcgggtgcagggcttcatcgccgcccat
gcgctgctgcgctggccgcccttcacggccgaccgggtggtgctctattcgagccatctc
ggccgcgagggcccgatctaccgggccctggccgactatccgctgcgcgtctggtag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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