KEGG   Stella vacuolata: STVA_50310
Entry
STVA_50310        CDS       T06335                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
svc  Stella vacuolata
Brite
KEGG Orthology (KO) [BR:svc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:svc03016]
    STVA_50310
Enzymes [BR:svc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     STVA_50310
Transfer RNA biogenesis [BR:svc03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    STVA_50310
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2 RNase_T
Other DBs
NCBI-ProteinID: BBK45011
Position
5334373..5334984
AA seq 203 aa
MTITLHRGDLPSGIDFGTCVAIDTETMGLNPHRDRLCLVQLSAGDGSAHLVQLPKGEYAA
PNLKALLGDRGVTKLFHFARFDVAALHRYLGVVAAPVYCTKIASRLTRTFTDRHGLKDLC
REMLGVDLSKQQQSSDWGAARLTDEQQRYAASDVLHLHALKARFDEMLAREGRTELAAAC
FRFLPTRALLDLAGWSEEDIFAH
NT seq 612 nt   +upstreamnt  +downstreamnt
gtgacgatcacccttcatcgcggcgacctgccctccggtatcgacttcggcacctgcgtc
gccatcgacaccgagacgatgggcctcaacccgcatcgcgaccggctctgcctcgtgcag
ctctcggccggcgacgggtccgcccatctggtccagctgcccaagggcgagtacgccgcc
ccgaacctgaaggcgctgctgggcgaccgcggcgtcaccaagctgttccatttcgcccgg
ttcgacgtggcggccctgcaccgctacctgggcgtggtcgcggcccccgtctactgcacc
aagatcgcctcgcgcctgacccggaccttcaccgaccggcacgggctgaaggatctctgc
cgcgagatgctgggcgtcgacctgtccaagcagcagcagtcttcggactggggggcggcg
cggctgaccgacgagcagcagcgctacgccgcctcggacgtgctgcatctgcacgcgctg
aaggcgcgcttcgacgagatgctggcgcgcgaggggcggaccgaactcgcggccgcctgc
ttccgtttcctgcccacgcgcgcactgctcgacctggccggctggagcgaggaagacatc
ttcgcccactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (3)   
   Pfam (3)   
All databases (10)   

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