KEGG   Saccharomonospora viridis: Svir_22350
Entry
Svir_22350        CDS       T00980                                 
Name
(GenBank) predicted rRNA methylase SpoU family
  KO
K03216  tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
Organism
svi  Saccharomonospora viridis
Brite
KEGG Orthology (KO) [BR:svi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:svi03016]
    Svir_22350
Enzymes [BR:svi01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.207  tRNA (cytidine34-2'-O)-methyltransferase
     Svir_22350
Transfer RNA biogenesis [BR:svi03016]
 Prokaryotic type
  tRNA modification factors
   Methyltransferases
    Svir_22350
SSDB
Motif
Pfam: SpoU_methylase
Other DBs
NCBI-ProteinID: ACU97243
UniProt: C7MXG4
Position
2404884..2405360
AA seq 158 aa
MFRIVFFHPEIPGNTGNAIRLAANTGCELHLIEPLGFSLEDRYLRRAGLDYHDLAHIQVH
RDLDAAWQALDPVHVYAFTTQAHRRHTDVDYAEGDVLLFGPESVGLPDEVLADERITDQV
RLPMLPTSRSLNLTNTAAIAVYEAWRQHDFRGSARQSS
NT seq 477 nt   +upstreamnt  +downstreamnt
gtgttccggatcgtgttcttccaccccgagatcccaggcaacaccggcaacgcgatccgg
ctcgccgccaacaccggctgcgagctgcatctgatcgagccactgggcttctccctcgag
gaccgatacctgcgccgggcgggactggactaccacgacctcgcccacatccaggtccac
cgcgacctggacgccgcatggcaggcactggaccccgtccacgtctacgcgttcaccaca
caggcgcaccgcagacacaccgatgtggactacgcggaaggtgatgtgctgttgttcggc
cccgagtcggtggggctgcccgacgaggtactcgccgacgagcggatcaccgatcaggtg
cggctgccgatgctgccgacgtcacgttccctcaacctgaccaataccgcggcgatcgcg
gtgtacgaggcgtggcggcaacacgacttccgtggttccgcccgacaatcctcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system