KEGG   Streptomyces violaceusniger: Strvi_0700
Entry
Strvi_0700        CDS       T01602                                 
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
svl  Streptomyces violaceusniger
Brite
KEGG Orthology (KO) [BR:svl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:svl03021]
    Strvi_0700
Transcription machinery [BR:svl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Strvi_0700
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_38
Other DBs
NCBI-ProteinID: AEM80473
UniProt: G2P016
Position
complement(503029..503835)
AA seq 268 aa
MYPHVGVDASGLATLRATVLDCLRGFVPTAYAVPGLAAPLPASPAVGTVNRPGQAGSCYA
LADGGAAVSRRSRGSTPTARRPGADSDSRRMMDLVERAQSGEAEAFGRLYDQYADTVYRY
IYYRVGGKATAEDLTSETFLRALRRIGTFTWQGRDFGAWLVTIARNLVADHFKSSRFRLE
VTTGEMLDANEVERSPEDSVLESLSNAALLQAVRKLNPQQQECVTLRFLQGLSVAETARV
MGKNEGAIKTLQYRAVRTLARLLPEDAR
NT seq 807 nt   +upstreamnt  +downstreamnt
gtgtacccacacgtcggggttgacgcctcgggcctggctacgctgcgcgcaacggtcctt
gactgtctgcgcggcttcgtccccaccgcgtatgccgtccccggcctcgccgcccccctg
cccgccagcccagccgtcggcacggtcaatcgccccggccaggccggttcgtgctacgca
ctggcggacggcggcgccgcggtcagcagacgctcccgcggctccacccccaccgcccgg
cgccccggcgccgacagcgacagccgtcgcatgatggacctcgtcgagcgcgcccagtcc
ggagaggccgaggcgttcggcaggctctacgaccagtacgccgacacggtctaccgctat
atctattaccgcgtgggcggcaaggccacggccgaggacctcaccagcgagacgttcctg
cgcgccctgcgccgcatcggcaccttcacctggcagggccgcgacttcggcgcctggctg
gtgaccatcgcgcgcaatctcgtcgccgaccacttcaagtccagccgcttccggctggag
gtcaccaccggcgagatgctcgacgccaacgaggtcgagcgcagccccgaggactccgtc
ctcgaatcgctgtccaacgccgctctcctgcaggcggtgcgaaaactcaacccgcagcag
caggagtgcgtgacgctccgcttcctccagggcctctcggtcgccgagaccgcccgggtc
atggggaagaacgagggcgcgatcaaaacccttcagtaccgggccgtgcgcaccctggcc
cggcttcttccggaggacgcccgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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