KEGG   Streptomyces violaceusniger: Strvi_2350
Entry
Strvi_2350        CDS       T01602                                 
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
svl  Streptomyces violaceusniger
Pathway
svl03030  DNA replication
svl03430  Mismatch repair
svl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:svl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Strvi_2350
   03430 Mismatch repair
    Strvi_2350
   03440 Homologous recombination
    Strvi_2350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:svl03032]
    Strvi_2350
   03400 DNA repair and recombination proteins [BR:svl03400]
    Strvi_2350
Enzymes [BR:svl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Strvi_2350
DNA replication proteins [BR:svl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Strvi_2350
DNA repair and recombination proteins [BR:svl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Strvi_2350
SSDB
Motif
Pfam: RNase_T RNase_H_2 DEDDh_C
Other DBs
NCBI-ProteinID: AEM82074
UniProt: G2NYK7
Position
2348619..2349341
AA seq 240 aa
MGWHRGLLIGFDLETTGTDPRTSRIVTAAVVEVRDGEPIGRREWLADPQVPIPDGAVAVH
GITNERAAAEGRSAREVVEEVAEVLVAHWRAGAPVVAYNAAFDLSLLAAELGRHGLRPLS
ERLEGAETGPVVDPYTIDRAVDRYRKGKRTLEAVCGEYGVVHDRAHDAGADALAAVRVAC
ALAERHREVAGLELWDLHRKQVGWYAGWAADFQSWLRRKGTPDAVVDGGWPLREAGAVMG
NT seq 723 nt   +upstreamnt  +downstreamnt
atgggctggcatcgggggctgctgatcggattcgatctggagacgacgggcaccgatccg
cggacgtcacggatcgtgacggcagccgtggtcgaggtgagggacggggagccgataggg
cggcgcgagtggctggccgatccccaagtgcccatccccgacggcgccgtggcggtccac
ggcatcaccaatgagcgggcggcggcggagggccggtccgcgcgtgaggtggtcgaggag
gtcgccgaggtgctggtggcccactggcgcgccggcgccccggtggtggcgtacaacgcg
gcgttcgatctcagcctgctcgccgccgagttggggcggcacgggctgcgcccgctgagc
gagcggttggagggcgcggagaccggccccgtggtggatccgtacacgatagatcgcgcg
gtcgaccgctatcgcaagggcaagcgcacgctggaggcggtctgcggggagtacggggtg
gtgcacgaccgagcccatgacgccggtgcggacgcgctggcggcggtgcgggtcgcctgc
gcgctcgccgagcgccaccgcgaggtggccgggctcgagctgtgggacctccaccgcaag
caggtggggtggtacgcgggctgggcggccgacttccagtcctggctgcgccgcaagggc
accccggacgcggtcgtggacggcggctggcccctgcgggaggccggcgcggtgatgggg
tag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system