KEGG T01602: Strvi

Streptomyces violaceusniger: Strvi_7195

Entry

Strvi_7195        CDS       T01602

Name

(GenBank) endonuclease 4

K01151

deoxyribonuclease IV [EC:3.1.21.2]

Organism

svl Streptomyces violaceusniger

Pathway

svl03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:svl00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Strvi_7195
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:svl03400]
    Strvi_7195
Enzymes [BR:svl01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     Strvi_7195
DNA repair and recombination proteins [BR:svl03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     Strvi_7195

SSDB

Motif

Pfam:

AP_endonuc_2 DUF2749

Other DBs

NCBI-ProteinID:

AEM86561

UniProt:

G2P6P1

Position

8230543..8231427

AA seq 294 aa
MSTHRIRNPIGGHIRVAGGLATVGLTHAAGIGAETVQVFVANPRGWATPAGTPAQDEAFR
AACAERSIPAYVHAPYLINFGSHTEATADRSVESLRHSLRRGREIGALGVVVHTGSATGG
RARATAIAQVRERMLPLLDELTRDDDPWLLLEPTAGQGTSLCALVEDLGPYVEALDRHPR
LGVCLDTCHVFAAGHDLAAPGGMKQTLDELVAVAGEGRLKLIHANDSKDVVGAHKDRHAN
IGAGHIGAEPFRELFSHPATDGVPLVIETPGGPDGTEGHAVDVARLKELRAVVA

NT seq 885 nt +upstreamnt +downstreamnt
gtgagtacgcatcgcatccgcaatcccatcggtggccatatccgtgtggccggtggcctc
gccaccgtcggtctgacgcacgccgccggcatcggcgccgagaccgtccaggtcttcgtc
gccaatccgcgcggctgggccaccccggccggtacgcccgcccaggacgaggcgttccgc
gccgcctgcgccgagcggtcgataccggcgtatgtccacgccccctacttgatcaacttc
ggttcgcacaccgaggccacggcggaccgctccgtggagtccctgcgtcattcgctccgg
cgcggccgggagatcggtgcgctcggcgtcgtcgtccacaccggctcggcgaccggggga
cgcgcgcgggccaccgcgatcgcacaggtgcgggagcggatgctgccgctgctggacgag
ctgacccgggacgacgacccctggctgctgctggagccgaccgccgggcagggcacctcg
ctgtgcgctctggtggaggacctgggcccgtacgtcgaggcgctcgaccggcatccccgg
ctcggtgtctgcctggacacctgccatgtgttcgcggccggccatgacctcgccgccccg
ggcggtatgaagcagaccctggacgagttggtcgccgtcgccggtgaggggcggctcaag
ctgatccacgccaatgactccaaggacgtggtcggcgcccacaaggaccggcacgcgaac
atcggcgcagggcatatcggggcggagccgttccgcgagctgttcagccaccccgcgacg
gacggggtgccgctggtgatcgagacgccgggcggaccggacggtacggaggggcatgcg
gtggatgtggcccggctgaaggagctgcgcgccgtggtggcctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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