KEGG   Shewanella violacea: SVI_0099
Entry
SVI_0099          CDS       T01206                                 
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
  KO
K01790  dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
Organism
svo  Shewanella violacea
Pathway
svo00521  Streptomycin biosynthesis
svo00523  Polyketide sugar unit biosynthesis
svo00541  O-Antigen nucleotide sugar biosynthesis
svo01100  Metabolic pathways
svo01110  Biosynthesis of secondary metabolites
svo01250  Biosynthesis of nucleotide sugars
Module
svo_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:svo00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    SVI_0099 (rfbC)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    SVI_0099 (rfbC)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    SVI_0099 (rfbC)
Enzymes [BR:svo01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.13  dTDP-4-dehydrorhamnose 3,5-epimerase
     SVI_0099 (rfbC)
SSDB
Motif
Pfam: dTDP_sugar_isom Peptidase_M1
Other DBs
NCBI-ProteinID: BAJ00070
UniProt: D4ZDE8
Position
complement(115208..115753)
AA seq 181 aa
MNITDTPIADLKLLSPRVHEDERGCFCETFRDSWFRQQIADVTFVQENHSRSIKGCLRGL
HFQSPRSQGKLIRVVVGEIFDVAVDLRKHSPSLGQWFGTYLSAKNRQQMWLPAGFAHGFY
VTSDSAEIIYKCTDYYAPEFEKTLTWDDDTLAIDWPLRGQLPILSSKDKIGLSFDDITQG
L
NT seq 546 nt   +upstreamnt  +downstreamnt
atgaacatcactgacacgccgatagcagatttaaaactactttctcctcgcgtccatgaa
gacgagcggggctgtttctgcgaaactttccgtgactcctggtttaggcagcagatagcc
gatgtcactttcgtgcaggagaaccatagccgctcgattaaaggctgcttaagaggctta
cattttcaatcaccacgcagccaaggcaagttaatacgtgtggtcgttggtgagatattc
gatgttgcggtcgatctacgcaaacacagtcctagcttaggtcaatggttcggtacatat
ctatcggcaaaaaatcgtcagcagatgtggcttccagcaggctttgcccacggcttttat
gttacttcagattctgcggagataatctacaagtgtaccgattattatgcccctgagttc
gagaaaaccctcacttgggacgatgacactcttgccatagactggccccttcggggacaa
ttacccatattatcaagcaaagataaaatagggctttccttcgatgacataacccagggc
ttgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (6)   
   KEGG MODULE (1)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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