KEGG   Shewanella violacea: SVI_0812
Entry
SVI_0812          CDS       T01206                                 
Symbol
gcdH
Name
(GenBank) glutaryl-CoA dehydrogenase
  KO
K00252  glutaryl-CoA dehydrogenase [EC:1.3.8.6]
Organism
svo  Shewanella violacea
Pathway
svo00071  Fatty acid degradation
svo00310  Lysine degradation
svo00362  Benzoate degradation
svo00380  Tryptophan metabolism
svo01100  Metabolic pathways
svo01110  Biosynthesis of secondary metabolites
svo01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:svo00001]
 09100 Metabolism
  09103 Lipid metabolism
   00071 Fatty acid degradation
    SVI_0812 (gcdH)
  09105 Amino acid metabolism
   00310 Lysine degradation
    SVI_0812 (gcdH)
   00380 Tryptophan metabolism
    SVI_0812 (gcdH)
  09111 Xenobiotics biodegradation and metabolism
   00362 Benzoate degradation
    SVI_0812 (gcdH)
Enzymes [BR:svo01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.8  With a flavin as acceptor
    1.3.8.6  glutaryl-CoA dehydrogenase (ETF)
     SVI_0812 (gcdH)
SSDB
Motif
Pfam: Acyl-CoA_dh_N Acyl-CoA_dh_1 Acyl-CoA_dh_M Acyl-CoA_dh_2
Other DBs
NCBI-ProteinID: BAJ00783
UniProt: D4ZGI4
Position
946416..947591
AA seq 391 aa
MARVHFDWTDPLQFNALLSEEERMIRDSVHDYAQDKLMPRVLMANRNEHFDREIMNELGE
LGLLGATLPEKYACSNINYVSYGLVAREIERVDSGYRSAMSVQSSLVMHPIYAYGTEAQR
LKYLPKLAKGEWIGCFGLTEPDVGSDPGGMRTRAERIDGGYRLNGAKMWITNSPIADVFI
VWGKLEGKIRGFILEKGMKGLSAPKIEGKFSLRASITGEIVMDNVEVPESALLPNVEGLK
GPFGCLNKARYGIAWGALGAAEFCWHAARQYTLDRIQFNRPLAANQLIQKKLADMQTEIT
LGLFTCLQAGRLMDQDALPVEAISLIKRNSCGKALDIARMARDMHGGNGISDEFHVIRHV
MNLEAVNTYEGTHDIHALILGRAQTGIQAFG
NT seq 1176 nt   +upstreamnt  +downstreamnt
atggcaagagtgcatttcgattggaccgatcccctgcagtttaacgccttactctcggaa
gaggagcgcatgatccgcgacagtgttcacgattatgctcaagacaaactcatgcccagg
gtattgatggccaacagaaatgagcatttcgatcgggagatcatgaatgagttaggtgag
ctgggtttgctgggagccaccttgcctgaaaaatatgcctgttccaatatcaattatgtt
agctatggcctagtggctcgtgagatagagcgagtcgacagtggttatcgttctgccatg
agtgtgcagtcctcattagtcatgcatcctatctatgcctacggtactgaagcgcagagg
ctaaagtatttacctaaactagcaaagggtgaatggattggttgttttggtttgactgag
ccagatgttggatccgatcccggtggcatgaggacccgcgccgaacgtatcgatggcggc
tatcgcctcaatggtgccaagatgtggatcacgaattcacccattgccgatgtgtttatt
gtctggggtaagctggaaggaaaaattcgaggcttcatcttggaaaaaggcatgaagggt
ttgagcgcgcctaaaatagagggcaaattttcccttagagcctccatcacaggcgaaata
gtcatggataatgtcgaagtgcctgagtctgcgttattgcctaatgttgagggcttgaag
ggcccctttggttgcttgaacaaggcgcgctacggcatagcttggggagcgctgggtgcc
gctgagttctgttggcatgcagcccgtcaatataccttagataggattcagtttaatcgc
cccttggcggccaatcagttaattcagaagaaactggcggatatgcagactgagatcacc
ttaggcttatttacctgcttacaggcggggcgtttgatggatcaagatgccctaccggta
gaagctatctctctgataaagcgcaactcctgtggcaaggcgctggatatcgcccgtatg
gctcgagatatgcacggtggtaatggtatatcagatgagtttcatgtcattcgccacgtc
atgaatctggaggcggtgaatacctacgagggcactcacgacatacatgcacttatctta
ggtcgagctcagacaggtattcaggcatttggataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (7)   
   KEGG MODULE (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (32)   

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