KEGG   Shewanella violacea: SVI_0938
Entry
SVI_0938          CDS       T01206                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
svo  Shewanella violacea
Brite
KEGG Orthology (KO) [BR:svo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:svo03019]
    SVI_0938 (rnc)
   03009 Ribosome biogenesis [BR:svo03009]
    SVI_0938 (rnc)
   03036 Chromosome and associated proteins [BR:svo03036]
    SVI_0938 (rnc)
Enzymes [BR:svo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     SVI_0938 (rnc)
Messenger RNA biogenesis [BR:svo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SVI_0938 (rnc)
Ribosome biogenesis [BR:svo03009]
 Eukaryotic type
  90S particles
   RNase
    SVI_0938 (rnc)
 Prokaryotic type
  rRNA processing factors
   SVI_0938 (rnc)
Chromosome and associated proteins [BR:svo03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     SVI_0938 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: BAJ00909
UniProt: D4ZGW0
Position
1089920..1090597
AA seq 225 aa
MEPIKNIPRLCRTLGYQFTQQAHLDQALTHRSASSKHNERLEFLGDSILSIIISDALYHQ
FPKVTEGDLSRMRATLVCGKMLAEIGFEFKLGDYLKLGPGELKSGGFRRESIIADGVEAI
IGAIYLDADLETCRARVLSWYESRLAIIEPINQKDPKTLLQELLQGFKKPLPVYKVTDIK
GEAHAQTFTVECSVEELKKPLVGVASSRRKAEQIAAAQVLELIKK
NT seq 678 nt   +upstreamnt  +downstreamnt
atggaaccgattaaaaatatcccgcgtctatgcaggactttaggctatcaatttacccaa
caagcgcatttagatcaggcactgactcatagaagtgcctctagcaagcataatgaacgt
ctagagtttctaggtgattcgatcttgtctattattatatctgatgcgctatatcaccaa
tttcccaaggtgactgaaggcgaccttagccgcatgcgagctacacttgtttgcggcaag
atgctggcggaaattgggtttgagtttaaacttggagactatcttaagttaggcccaggt
gaacttaaaagtggtgggttcaggcgtgagtcgatcattgccgatggggtagaggccatc
ataggtgctatctatctcgatgccgatttggagacctgtcgagctcgagttctgagctgg
tatgagtcacgcttggcaatcatagagcctattaatcagaaagatcccaagaccttgcta
caagagttgttgcaaggttttaagaagcctctgccagtttacaaagtgacagatattaaa
ggtgaggcacatgcacagaccttcacggtcgagtgtagcgtcgaagagttgaagaaaccc
cttgttggggttgcaagttcacgaagaaaagctgagcagattgccgctgcacaggttttg
gagttaatcaaaaaatga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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