KEGG   Shewanella violacea: SVI_1372
Entry
SVI_1372          CDS       T01206                                 
Name
(GenBank) conserved hypothetical protein
  KO
K06941  23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
Organism
svo  Shewanella violacea
Brite
KEGG Orthology (KO) [BR:svo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:svo03009]
    SVI_1372
Enzymes [BR:svo01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.192  23S rRNA (adenine2503-C2)-methyltransferase
     SVI_1372
Ribosome biogenesis [BR:svo03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    SVI_1372
SSDB
Motif
Pfam: RlmN_N Radical_SAM Radical_SAM_2 Fer4_12
Other DBs
NCBI-ProteinID: BAJ01343
UniProt: D4ZI44
Position
1569943..1571082
AA seq 379 aa
MLRLVKMSEKKINLLDLDRKGLRALFTDMGEKPFRADQLMKWIYHFGVSDFELMTNINKG
LRAKLAARCEITAPQISSYQKSEDGTIKFAINVGDGQEVETVYIPEGDRATLCVSSQVGC
ALECTFCSTAQQGFNRNLTVSEIIGQVWRVADFIGFIKDTGERPITNVVMMGMGEPLLNL
KNVIPAMDIMLDDFGFSLSKRRVTLSTSGVVPALDILGDAIDVALAVSIHAANDELRDVL
VPVNKKYPLEEFLAAIRRYIAKSNANRGRVTVEYVMLDHINDSTDQAHELAKLMKDTPCK
INLIPFNPYPGSPYGRSSNSRIDRFSKVLMEYGFTVIVRKTRGDDIDAACGQLAGDIRDR
TKRLAKKRMQENQISVTIN
NT seq 1140 nt   +upstreamnt  +downstreamnt
gtgttgaggttagtcaaaatgagtgaaaagaagatcaatttattggatctggatcgtaaa
ggattgagagcattattcaccgatatgggtgagaagccgttccgtgcggatcagctgatg
aagtggatttatcattttggcgtcagtgacttcgaacttatgactaatatcaataaggga
ctgagggctaaacttgccgcgcgttgtgaaattaccgcgccgcaaatatccagttatcag
aagtcagaagacggcacgattaaatttgccatcaatgtaggtgatggtcaggaagttgag
accgtgtatatccccgaaggtgatagagccactctgtgtgtgtcttcacaagttggttgt
gcgctggaatgcaccttctgttcgacggctcagcaaggattcaaccgtaatttgactgtc
tctgaaattatcggtcaagtgtggcgtgttgccgattttatcggtttcatcaaagacacc
ggcgaacgcccaatcactaatgtggtgatgatgggcatgggcgaacctctgttaaatctt
aaaaacgtgattccggctatggatatcatgctagatgattttggtttcagcttgtctaaa
aggcgcgtgaccttgtctacttcgggtgttgttccagccttagatatacttggtgatgcc
atagatgttgctcttgctgtgagtattcatgcagccaatgatgaattacgtgatgtctta
gtgccggttaataagaagtatcctcttgaggagttcttagccgctattcgtcgttatatc
gctaagtctaatgctaaccgaggtcgtgtcactgtagagtatgtgatgttagatcacatt
aacgacagcacagatcaggcccatgagctggctaaactgatgaaagacaccccatgtaag
attaatctaattccatttaatccatatcctggttctccatacggtcgttcttctaattct
cgtatcgatcgtttctctaaagtcttgatggaatatggcttcacagtcatagtgagaaag
actcgtggagacgatatcgatgctgcctgtggacagttggcgggcgatattcgagataga
accaagcgtttagcgaaaaaacgcatgcaagagaaccaaatatcagtcacaataaactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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