KEGG   Shewanella violacea: SVI_1570
Entry
SVI_1570          CDS       T01206                                 
Symbol
rluA-1
Name
(GenBank) ribosomal large subunit pseudouridine synthase A
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
svo  Shewanella violacea
Brite
KEGG Orthology (KO) [BR:svo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:svo03009]
    SVI_1570 (rluA-1)
   03016 Transfer RNA biogenesis [BR:svo03016]
    SVI_1570 (rluA-1)
Enzymes [BR:svo01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     SVI_1570 (rluA-1)
    5.4.99.29  23S rRNA pseudouridine746 synthase
     SVI_1570 (rluA-1)
Ribosome biogenesis [BR:svo03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    SVI_1570 (rluA-1)
Transfer RNA biogenesis [BR:svo03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    SVI_1570 (rluA-1)
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: BAJ01541
UniProt: D4ZIP2
Position
complement(1806578..1807234)
AA seq 218 aa
MQIFTYAPPSVPWLDIRYQDRDILVINKPSGLLSNPGRAANTYDCALTRLLQRYPEIILV
HRLDCATSGIMVFALNKKAESNIKTQFQNRMSKKTYIAEVLGQLNQDQGVIDLAMKADKI
RPPLQEIAEDGKVSKTYYKVLERRETSTLVELKPVTGRTHQLRLHMLALGHPILGDEFYG
DADVIAASNRLKLHAMSLTIAHPFSGKEMTFKSFHPFQ
NT seq 657 nt   +upstreamnt  +downstreamnt
atgcaaatattcacttacgctcccccttcggtcccttggttagatatacgctatcaagac
cgggatatactggttatcaacaaaccttcgggtctactgtccaatcctggtcgtgcagcc
aatacctacgattgcgcgcttactcgtttacttcagagataccctgaaataatactggta
caccgtctagactgtgcgacttctggcattatggtttttgccttaaataagaaggcagag
tctaatatcaagacccaatttcagaacagaatgagtaaaaaaacctacattgctgaggtt
ctcggacaattgaatcaagatcaaggagtgatcgatttggcaatgaaagcagataaaatc
cggcctccactgcaagagattgccgaagatggcaaagtatctaagacctattacaaggtg
ttggagcgcagagaaaccagtaccttagtagagttaaagccggttactggaagaacacat
cagctcagattacacatgctagctttaggtcatccaatactaggtgatgaattttatggt
gatgcagatgtgatagcggcatctaacagactgaaattacatgcaatgtcattgaccata
gctcatcctttttcaggtaaagagatgacatttaagagttttcacccttttcagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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