KEGG   Shewanella violacea: SVI_2930
Entry
SVI_2930          CDS       T01206                                 
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
  KO
K21636  ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
Organism
svo  Shewanella violacea
Pathway
svo00230  Purine metabolism
svo00240  Pyrimidine metabolism
svo01100  Metabolic pathways
svo01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:svo00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    SVI_2930 (nrdD)
   00240 Pyrimidine metabolism
    SVI_2930 (nrdD)
Enzymes [BR:svo01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.98  With other, known, physiological acceptors
    1.1.98.6  ribonucleoside-triphosphate reductase (formate)
     SVI_2930 (nrdD)
SSDB
Motif
Pfam: NRDD Gly_radical ATP-cone Zn_Tnp_IS91
Other DBs
NCBI-ProteinID: BAJ02901
UniProt: D4ZMK2
Position
complement(3318278..3320395)
AA seq 705 aa
MPVVIKRDGCRTPFDETRIRDAVVAAANSAGIDDKNYAMSVADSVAKCVADKTEIDIHDL
QDLVENHLMEGPYKSLARVYIEYRHDRDLHRETSSRLNQEIRGLIEQTNAALMNENANKD
AKVIPTQRDLLAGIVAKHYATRHILPKDVVGAHESGEIHYHDLDYAPFFPMFNCMLIDLS
GMLTNGFKMGNAEIETPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTKSYD
KQYQLALDWGITDAKAFATAQTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSW
ESHLIQSSMLKVRIAGLGKNRKTAVFPKLVFAIRDGINHKVGDRNYDIKQLALKCATTRM
YPDILNYEQVEKVTGSFKTPMGCRSFLGTYEEGGELIHEGRNNLGVVSLNLPRVALEAKG
DETQFYRILDLRLAIARKALDTRIERLEGVKARVAPILYMEGACGVRLKADEDISSIFKN
GRASISLGYIGLHETINALYGTDKHVYDCEILRQKAIEVIEYMKAATDKWKQETGYAFSL
YSTPSENLCSRFCKLDTQVFGVVEGVTNKGYYTNSFHLDVEKQVNPYDKLDFEQPYPALT
NGGFICYGEYPNMQHNLEALEDVWDYSYSRVPYYGTNTPIDECYDCGFTGEFECASKGFT
CPKCGNHEPSRVSVTRRVCGYLGSPDARPFNDGKQEEVKRRVKHL
NT seq 2118 nt   +upstreamnt  +downstreamnt
atgccagtggttattaagcgggatggttgccgcacgccttttgacgaaacaaggattaga
gacgctgtggtggctgcagcgaattcggcaggtattgatgacaagaattatgcgatgagt
gtcgcagattctgtcgctaaatgtgtggccgataagactgagatagatattcatgatctg
caagacttggtcgaaaatcacttgatggaaggcccttataagtctctcgctcgcgtctat
atcgagtatcgtcatgatagagatttacaccgtgaaaccagcagcagactgaatcaggaa
atccgtggtctaatcgagcagaccaatgcagccctgatgaatgaaaatgctaataaagac
gctaaagtgatcccgactcagcgtgacttattagccgggattgtggctaaacattatgct
acccgacatattttacccaaggatgtggttggggctcatgagtctggtgagatccattat
catgatcttgattatgcgcctttcttccccatgtttaactgtatgttgatcgatcttagt
ggcatgttgactaatggcttcaagatgggcaacgccgagattgagacgcctaagtctatc
tctacggcaacggcagtgacggcgcagatcatcgcccaggtagccagtcacatctatggt
ggcaccacgattaatcgtatcgatgaagtattggctcctttcgtcaccaagagttatgac
aagcagtatcagctggcgctggactggggcatcacagatgctaaagccttcgccaccgcg
caaactgaaaaagagtgttacgatgcgttccagtccctggaatacgaggtcaacacctta
catacagccaatggtcaaacgccatttgtcacctttggttttggtttaggcacctcttgg
gagtctcaccttatacaatcgtctatgttgaaagtgcgcatcgcgggtttgggtaaaaac
cgtaagacagcagtatttcctaaactagtgtttgctattcgtgacggcattaaccacaag
gtgggcgaccgtaactatgatatcaagcaacttgcgctcaagtgcgccacgacccgcatg
tatccagatattctcaactatgagcaagtagaaaaggtcacagggtcatttaagactcct
atgggatgccgcagtttccttggcacctatgaagaaggtggtgagctgatccacgaaggt
cgtaacaacttaggtgtggtgagtttgaacctgccaagggttgcgttggaagccaaggga
gatgaaacccaattttatcgaatcttagatctgcgtctggctattgcccgtaaggctctg
gacaccagaattgagcgtttagaaggtgttaaagcgcgggtagctcccattctgtatatg
gaaggggcttgtggagtaaggcttaaagccgatgaggatatatcaagtattttcaaaaat
ggccgcgcctccatttctctgggctatatcggattgcatgaaactatcaatgccctctac
ggcacagataagcatgtctatgattgcgaaatcttgcgccaaaaagccattgaagtcatt
gagtatatgaaagcggcaaccgacaagtggaaacaggagactggctacgctttcagtctc
tacagtacaccgagtgaaaacctctgtagtcgtttttgtaagctagatactcaggtcttt
ggtgtcgtggaaggggtgaccaacaaaggttattacaccaatagctttcatctcgatgtg
gaaaagcaagtcaatccatacgacaagttggattttgagcagccatatccagcattaact
aacggtggtttcatctgttacggtgaatatccgaatatgcagcataacctcgaagcattg
gaagatgtgtgggactacagttacagccgagtgccatattacggcaccaacacgcctata
gatgagtgttatgactgtggttttaccggtgagtttgaatgtgccagtaagggtttcacc
tgccccaagtgtggcaatcatgaaccgagtcgggtttctgtaacccgtcgagtctgtggt
tacttaggcagtcccgatgcaaggcccttcaacgatggcaaacaagaagaggttaagcga
cgggttaagcacctgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (31)   

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